Pairwise Alignments

Query, 338 a.a., phage shock protein operon transcriptional activator from Vibrio cholerae E7946 ATCC 55056

Subject, 476 a.a., Nitrogen regulation protein NtrC from Xanthomonas campestris pv. campestris strain 8004

 Score =  208 bits (530), Expect = 2e-58
 Identities = 112/229 (48%), Positives = 153/229 (66%), Gaps = 1/229 (0%)

Query: 4   SLLGESPAFLAVLDKVSRLAPIDRPVLVIGERGTGKELIAQRLHYLSKRWEQPLVSLNCS 63
           +L+G++PA  A+   + RLA     VL+ GE GTGKEL+A+ LH  S R  +P V+LN +
Sbjct: 146 ALIGDTPAMQALFRAIGRLAQAPLSVLINGETGTGKELVARALHNESPRSRKPFVALNTA 205

Query: 64  TLSEGLIDSELFGHESGSFTGAKGRHQGRFERAEGGTLFLDELATAPLSVQEKLLRVIEY 123
            +   L++SELFGHE+G+FTGA  RH GRFE+A+GGTLFLDE+   PL +Q +LLRV+  
Sbjct: 206 AIPAELLESELFGHETGAFTGATKRHIGRFEQADGGTLFLDEIGDMPLPLQTRLLRVLAE 265

Query: 124 GQYERVGGNQVLNANVRLVCATNANLPQMAQQGTFRADLLDRLAFDVIHLPALRHRPEDI 183
            ++ RVGG +++  +VR++ AT+ +L  + +QG FRADLL RL    + LP LR R  DI
Sbjct: 266 NEFFRVGGRELIRVDVRVIAATHQDLEALVEQGRFRADLLHRLDVVRLQLPPLRERRGDI 325

Query: 184 ALLAEHFAIRMCRELQLPLFVGFSPNALHQLQAYSWPGNVRELKNVVER 232
           A LAE+F     R+L + L    S  AL  L+ Y WPGNVREL+NV  R
Sbjct: 326 AQLAENFLAMAGRKLDM-LPKRLSSAALEALRQYDWPGNVRELENVCWR 373