Pairwise Alignments

Query, 338 a.a., phage shock protein operon transcriptional activator from Vibrio cholerae E7946 ATCC 55056

Subject, 494 a.a., Two-component response regulator CbrB from Pseudomonas syringae pv. syringae B728a

 Score =  206 bits (523), Expect = 1e-57
 Identities = 107/230 (46%), Positives = 149/230 (64%), Gaps = 1/230 (0%)

Query: 5   LLGESPAFLAVLDKVSRLAPIDRPVLVIGERGTGKELIAQRLHYLSKRWEQPLVSLNCST 64
           ++G  P  L +  K+ ++AP D  VL+ GE GTGKEL+A+ LH LS+R + P++S+NC+ 
Sbjct: 166 IIGSCPPMLDLYSKIRKVAPTDSNVLIQGESGTGKELVARALHNLSRRAKAPMISVNCAA 225

Query: 65  LSEGLIDSELFGHESGSFTGAKGRHQGRFERAEGGTLFLDELATAPLSVQEKLLRVIEYG 124
           + E LI+SELFGHE G+FTGA     G  E A+GGTLFLDE+   PL  Q +LLRV++ G
Sbjct: 226 IPESLIESELFGHEKGAFTGASAGRAGLVEAADGGTLFLDEIGELPLEAQARLLRVLQEG 285

Query: 125 QYERVGGNQVLNANVRLVCATNANLPQMAQQGTFRADLLDRLAFDVIHLPALRHRPEDIA 184
           +  RVG  Q    +VRL+ AT+ +L  +A+ G FR DL  RL    + LPALR R  DI 
Sbjct: 286 EIRRVGSVQSQKVDVRLIAATHRDLKTLAKNGEFREDLFYRLHVIALKLPALRERGNDIL 345

Query: 185 LLAEHFAIRMCRELQLPLFVGFSPNALHQLQAYSWPGNVRELKNVVERAV 234
            +A  F +R   ++     + F+ +A   ++ YSWPGNVREL+N VER+V
Sbjct: 346 EIAHAFLVRQSGKVGRD-DLKFAHDAEQAIRHYSWPGNVRELENAVERSV 394