Pairwise Alignments

Query, 338 a.a., phage shock protein operon transcriptional activator from Vibrio cholerae E7946 ATCC 55056

Subject, 484 a.a., nitrogen assimilation regulatory protein from Sinorhizobium meliloti 1021

 Score =  206 bits (523), Expect = 1e-57
 Identities = 131/337 (38%), Positives = 191/337 (56%), Gaps = 20/337 (5%)

Query: 5   LLGESPAFLAVLDKVSRLAPIDRPVLVIGERGTGKELIAQRLHYLSKRWEQPLVSLNCST 64
           L+G S A   +   ++RL   D  +++ GE GTGKEL+A+ LH   KR   P V++N + 
Sbjct: 139 LVGRSAAMQEIYRVLARLMQTDLTLMITGESGTGKELVARALHDYGKRRNGPFVAINMAA 198

Query: 65  LSEGLIDSELFGHESGSFTGAKGRHQGRFERAEGGTLFLDELATAPLSVQEKLLRVIEYG 124
           +   LI+SELFGHE G+FTGA+ R  GRFE+AEGGTLFLDE+   P+  Q +LLRV++ G
Sbjct: 199 IPRDLIESELFGHEKGAFTGAQTRSTGRFEQAEGGTLFLDEIGDMPMDAQTRLLRVLQQG 258

Query: 125 QYERVGGNQVLNANVRLVCATNANLPQMAQQGTFRADLLDRLAFDVIHLPALRHRPEDIA 184
           +Y  VGG   + ++VR+V ATN +L Q   QG FR DL  RL    + LP LR R EDI 
Sbjct: 259 EYTTVGGRTPIRSDVRIVAATNKDLKQSINQGLFREDLYYRLNVVPLRLPPLRDRAEDIP 318

Query: 185 LLAEHFAIRMCRE-LQLPLFVGFSPNALHQLQAYSWPGNVRELKNVVER--AVYQHGLNS 241
            L  HF  +  +E L +  F      AL  ++A+ WPGNVREL+N+V R  A+Y   + +
Sbjct: 319 DLVRHFVQQAEKEGLDVKRF---DQEALELMKAHPWPGNVRELENLVRRLTALYPQDVIT 375

Query: 242 QPI------DQLVFNPFQ-----SSDIVTDESEQVDVR-HTTRTDFHLPLD--YKAWQQQ 287
           + I       ++  +P +     S  +   ++ + ++R +       LP    Y     +
Sbjct: 376 REIIENELRSEIPDSPIEKAAARSGSLSISQAVEENMRQYFASFGDALPPSGLYDRVLAE 435

Query: 288 CDIELLQAALTQAKFNQKHAAQLLGLSYHQFRGMMRK 324
            +  L+ AALT  + NQ  AA LLGL+ +  R  +R+
Sbjct: 436 MEYPLILAALTATRGNQIKAADLLGLNRNTLRKKIRE 472