Pairwise Alignments

Query, 338 a.a., phage shock protein operon transcriptional activator from Vibrio cholerae E7946 ATCC 55056

Subject, 357 a.a., psp operon transcriptional activator (RefSeq) from Shewanella amazonensis SB2B

 Score =  382 bits (980), Expect = e-110
 Identities = 192/345 (55%), Positives = 250/345 (72%), Gaps = 21/345 (6%)

Query: 2   QQSLLGESPAFLAVLDKVSRLAPIDRPVLVIGERGTGKELIAQRLHYLSKRWEQPLVSLN 61
           Q +L+G+S A L VL+ VSR+AP+ +PVL+IGERGTGKELIA+RLHYLS+RW+Q  + LN
Sbjct: 7   QDNLIGQSNALLEVLEHVSRIAPLSKPVLIIGERGTGKELIAERLHYLSQRWDQSFLKLN 66

Query: 62  CSTLSEGLIDSELFGHESGSFTGAKGRHQGRFERAEGGTLFLDELATAPLSVQEKLLRVI 121
           CS+LSE L++SELFGHESG+FTGAKGRH+GRFERA+GGTLFLDELA     +QEKLLRVI
Sbjct: 67  CSSLSENLLESELFGHESGAFTGAKGRHEGRFERADGGTLFLDELANTSGLIQEKLLRVI 126

Query: 122 EYGQYERVGGNQVLNANVRLVCATNANLPQMAQQGTFRADLLDRLAFDVIHLPALRHRPE 181
           EYG+YERVGG++ L A+VRL+CA N +LP +A+ G FRADLLDRLAFDVI LP LR R E
Sbjct: 127 EYGEYERVGGSKTLQADVRLICAANEDLPSLAEAGEFRADLLDRLAFDVITLPPLRSRKE 186

Query: 182 DIALLAEHFAIRMCRELQLPLFVGFSPNALHQLQAYSWPGNVRELKNVVERAVYQHGLNS 241
           DI  LAE+F + M R+L+L  F GF+P+A+ QL ++ WPGN+RELKNV+ER+VY+ G + 
Sbjct: 187 DIMPLAEYFGVGMARQLKLEYFPGFAPHAIEQLLSHQWPGNIRELKNVIERSVYRSGADG 246

Query: 242 QPIDQLVFNPFQS---------------SDIVTDESEQVDVRHTTRTDFH------LPLD 280
           +PI+ +V +PF S                  +  E +      TT            PLD
Sbjct: 247 EPIEHIVLDPFDSPWRPKGRIKTRERQVQPALAPEPKSEPTFATTAAVSECAPTPSFPLD 306

Query: 281 YKAWQQQCDIELLQAALTQAKFNQKHAAQLLGLSYHQFRGMMRKY 325
            K   +  + +L+Q AL  ++FNQK +A +LGLSYHQ RG+++KY
Sbjct: 307 LKEHLEAVEKDLIQQALAASQFNQKKSADMLGLSYHQLRGILKKY 351