Pairwise Alignments

Query, 338 a.a., phage shock protein operon transcriptional activator from Vibrio cholerae E7946 ATCC 55056

Subject, 415 a.a., sigma-54-dependent Fis family transcriptional regulator from Pedobacter sp. GW460-11-11-14-LB5

 Score =  200 bits (509), Expect = 5e-56
 Identities = 102/228 (44%), Positives = 144/228 (63%), Gaps = 1/228 (0%)

Query: 5   LLGESPAFLAVLDKVSRLAPIDRPVLVIGERGTGKELIAQRLHYLSKRWEQPLVSLNCST 64
           ++G SP     +D  S++AP D  VL+ GE G+GKE+ +Q +H +S R     +++NC  
Sbjct: 12  IIGNSPLLNRAIDIASQVAPTDMSVLITGESGSGKEVFSQIIHQMSARKHGAFIAVNCGA 71

Query: 65  LSEGLIDSELFGHESGSFTGAKGRHQGRFERAEGGTLFLDELATAPLSVQEKLLRVIEYG 124
           + EG IDSELFGHE GSFTGA    +G FE A GGT+FLDE+A  PL  Q +LLR++E G
Sbjct: 72  IPEGTIDSELFGHEKGSFTGAHEARKGYFEVANGGTIFLDEVAELPLGTQARLLRILESG 131

Query: 125 QYERVGGNQVLNANVRLVCATNANLPQMAQQGTFRADLLDRLAFDVIHLPALRHRPEDIA 184
           +Y RVG ++V   +VR++ ATN ++    + G FR DL  RL    + +PAL+ R EDI 
Sbjct: 132 EYLRVGSSKVQKTDVRIIAATNVDVYNRVKNGKFREDLYYRLNTVPLRIPALQERKEDIY 191

Query: 185 LLAEHFAIRMCRELQLPLFVGFSPNALHQLQAYSWPGNVRELKNVVER 232
           LL   F+     + + P  +   P+A+  L  YSWPGNVR+LKN+ E+
Sbjct: 192 LLFRKFSADFSDKYRSPA-LHLEPDAIQILTNYSWPGNVRQLKNIAEQ 238