Pairwise Alignments

Query, 338 a.a., phage shock protein operon transcriptional activator from Vibrio cholerae E7946 ATCC 55056

Subject, 577 a.a., Nif-specific regulatory protein from Dechlorosoma suillum PS

 Score =  218 bits (554), Expect = 4e-61
 Identities = 118/231 (51%), Positives = 150/231 (64%), Gaps = 2/231 (0%)

Query: 3   QSLLGESPAFLAVLDKVSRLAPIDRPVLVIGERGTGKELIAQRLHYLSKRWEQPLVSLNC 62
           ++++G S     V   V + AP +  +L+ GE GTGKE IA  +HYLS R + P V +NC
Sbjct: 201 ENVIGRSKRMKEVFADVHQAAPGNSTILLRGESGTGKEAIAHAIHYLSPRSKGPFVKVNC 260

Query: 63  STLSEGLIDSELFGHESGSFTGAKGRHQGRFERAEGGTLFLDELATAPLSVQEKLLRVIE 122
           + L E L++SELFGHE G+FTGA    +GRFE A+GGTLFLDE+     S Q KLLRV++
Sbjct: 261 AALPETLLESELFGHEKGAFTGATAERKGRFEMADGGTLFLDEIGDISSSFQAKLLRVLQ 320

Query: 123 YGQYERVGGNQVLNANVRLVCATNANLPQMAQQGTFRADLLDRLAFDVIHLPALRHRPED 182
             ++ERVGGN+   AN RLV ATN NL +M Q+G FRADL  RL    I LP LR R ED
Sbjct: 321 EHEFERVGGNKTHKANFRLVAATNRNLEEMVQKGDFRADLYFRLNVVAILLPPLRERKED 380

Query: 183 IALLAEHFAIRMCRELQLPLFVGFSPNALHQLQAYSWPGNVRELKNVVERA 233
           I LL + F  R  RE    L +  +P A+  LQ  +WPGNVREL+N +ERA
Sbjct: 381 IPLLVDFFLSRFNRENNRKLTI--TPGAVEILQHCNWPGNVRELENCIERA 429