Pairwise Alignments

Query, 338 a.a., phage shock protein operon transcriptional activator from Vibrio cholerae E7946 ATCC 55056

Subject, 579 a.a., transcriptional regulator, NifA subfamily, Fis Family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  206 bits (524), Expect = 1e-57
 Identities = 104/228 (45%), Positives = 149/228 (65%), Gaps = 2/228 (0%)

Query: 5   LLGESPAFLAVLDKVSRLAPIDRPVLVIGERGTGKELIAQRLHYLSKRWEQPLVSLNCST 64
           ++G S A L V  ++ R+AP    VL++GE G GK LIA+ LH LS R   P V +NC++
Sbjct: 197 IVGRSAAMLDVQRQIERVAPTRATVLLLGESGVGKTLIARLLHNLSDRMVHPFVKVNCAS 256

Query: 65  LSEGLIDSELFGHESGSFTGAKGRHQGRFERAEGGTLFLDELATAPLSVQEKLLRVIEYG 124
           + E L+++ELFGHE G+FTGA     GRFE A  GT+FLDE+   P  +Q KLLRVI+  
Sbjct: 257 IPETLLEAELFGHEKGAFTGAAAVRAGRFEEAHRGTIFLDEIGELPPGIQAKLLRVIQDR 316

Query: 125 QYERVGGNQVLNANVRLVCATNANLPQMAQQGTFRADLLDRLAFDVIHLPALRHRPEDIA 184
           ++ER+G NQ    +VR+V ATN +L  +++QG FR DL  RL    I +P+LR RP+D+ 
Sbjct: 317 EFERLGSNQTHRVDVRIVAATNRDLALLSEQGRFRQDLYYRLCVFPIRVPSLRERPDDVE 376

Query: 185 LLAEHFAIRMCRELQLPLFVGFSPNALHQLQAYSWPGNVRELKNVVER 232
            L  HF  +  R+ +    +  +P+AL  L+ + WPGNVRE++N++ER
Sbjct: 377 RLLNHFLAKAARDYR--RVITLAPDALGLLRRHEWPGNVREMENLIER 422