Pairwise Alignments

Query, 338 a.a., phage shock protein operon transcriptional activator from Vibrio cholerae E7946 ATCC 55056

Subject, 647 a.a., ATPase AAA from Klebsiella michiganensis M5al

 Score =  210 bits (534), Expect = 9e-59
 Identities = 124/311 (39%), Positives = 178/311 (57%), Gaps = 9/311 (2%)

Query: 9   SPAFLAVLDKVSRLAPIDRPVLVIGERGTGKELIAQRLHYLSKRWEQPLVSLNCSTLSEG 68
           S AF ++LDK   LAP +  VL++GE GTGKE++A+ LH+ S R ++P +++NC  LSE 
Sbjct: 18  SKAFQSLLDK---LAPTEATVLIVGETGTGKEVVARYLHHHSPRRQRPFLAVNCGALSES 74

Query: 69  LIDSELFGHESGSFTGAKGRHQGRFERAEGGTLFLDELATAPLSVQEKLLRVIEYGQYER 128
           L ++ELFGHE G+FTGA   H G FE AEGGTL LDE+    L++Q KLLRV++  +  R
Sbjct: 75  LAEAELFGHEKGAFTGAVQSHPGWFEAAEGGTLLLDEIGELSLALQVKLLRVLQEREITR 134

Query: 129 VGGNQVLNANVRLVCATNANLPQMAQQGTFRADLLDRLAFDVIHLPALRHRPEDIALLAE 188
           VG  + +  +VR++ AT+ +L Q  ++  FR DL  RL   ++ LP LR R +DI +LA+
Sbjct: 135 VGSRKAVKVDVRVIAATHVDLMQAIRERRFREDLYYRLNIAIVPLPPLRQRRQDIPVLAD 194

Query: 189 HFAIRMCRELQLPLFVGFSPNALHQLQAYSWPGNVRELKNVVERAVYQHGLNSQPIDQLV 248
           HF     R L  P+    +P  L +L  Y WPGN+REL+N +  AV           QL 
Sbjct: 195 HFLSLYARRLGRPI-RRLAPETLARLMEYPWPGNIRELENTLHNAVLLSKEEEIGPAQLR 253

Query: 249 FNPFQSSDIVTDESEQVDVRHTTRTDFHLPLDYKAWQQQCDIELLQAALTQAKFNQKHAA 308
                +      ++E  D     R    LP +   W++     L++ A+  +  NQ  AA
Sbjct: 254 LTTLNNEPSAVGDNELDDF---IRRQLSLPGE-PLWERVTG-ALIRGAMAHSDDNQSQAA 308

Query: 309 QLLGLSYHQFR 319
            LLG+S H  R
Sbjct: 309 ALLGISRHALR 319