Pairwise Alignments

Query, 338 a.a., phage shock protein operon transcriptional activator from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., phage shock protein operon transcriptional activator from Klebsiella michiganensis M5al

 Score =  417 bits (1072), Expect = e-121
 Identities = 208/324 (64%), Positives = 255/324 (78%), Gaps = 6/324 (1%)

Query: 2   QQSLLGESPAFLAVLDKVSRLAPIDRPVLVIGERGTGKELIAQRLHYLSKRWEQPLVSLN 61
           + +LLGE+ +FL VL++VSRLAP+D+PVLVIGERGTGKELIA RLH+LS RW+ P +SLN
Sbjct: 5   KDNLLGEANSFLEVLEQVSRLAPLDKPVLVIGERGTGKELIASRLHFLSSRWQGPFISLN 64

Query: 62  CSTLSEGLIDSELFGHESGSFTGAKGRHQGRFERAEGGTLFLDELATAPLSVQEKLLRVI 121
           C+ L+E L+DSELFGHE+G+FTGA  RH GRFERA+GGTLFLDELATAP+ VQEKLLRVI
Sbjct: 65  CAALNENLLDSELFGHEAGAFTGASKRHPGRFERADGGTLFLDELATAPMLVQEKLLRVI 124

Query: 122 EYGQYERVGGNQVLNANVRLVCATNANLPQMAQQGTFRADLLDRLAFDVIHLPALRHRPE 181
           EYG+ ERVGG+Q L  NVRLVCATNA+LPQM + G FRADLLDRLAFDV+ LP LR R  
Sbjct: 125 EYGELERVGGSQPLQVNVRLVCATNADLPQMVEDGLFRADLLDRLAFDVVQLPPLRERQS 184

Query: 182 DIALLAEHFAIRMCRELQLPLFVGFSPNALHQLQAYSWPGNVRELKNVVERAVYQHGLNS 241
           DI LLA  FAI+MCREL LPLF GFS  A   LQ Y WPGN+RELKNVVER+VY+HG + 
Sbjct: 185 DIMLLATQFAIQMCRELGLPLFPGFSERAAETLQNYRWPGNIRELKNVVERSVYRHGSSE 244

Query: 242 QPIDQLVFNPFQSSDIVTDESEQVDVRHTTRTDFHLPLDYKAWQQQCDIELLQAALTQAK 301
           + +D ++ NPF+     T     V+V  T      LPLD +A+QQ+ +  LL+ +L QAK
Sbjct: 245 RELDNIIINPFRQQHTAT----PVEVEKTPGPT--LPLDLRAFQQEQEKSLLERSLEQAK 298

Query: 302 FNQKHAAQLLGLSYHQFRGMMRKY 325
           +NQK AA+LLGL+YHQ R +++K+
Sbjct: 299 YNQKQAAELLGLTYHQLRALLKKH 322