Pairwise Alignments

Query, 338 a.a., phage shock protein operon transcriptional activator from Vibrio cholerae E7946 ATCC 55056

Subject, 381 a.a., psp operon transcriptional activator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  302 bits (773), Expect = 1e-86
 Identities = 172/359 (47%), Positives = 227/359 (63%), Gaps = 40/359 (11%)

Query: 6   LGESPAFLAVLDKVSRLAPIDRPVLVIGERGTGKELIAQRLHYLSKRWEQPLVSLNCSTL 65
           LG+S AFLA  +++SR+A +DRPVL++GERGTGKEL A RLH+LS+RW+ P V L+ ++L
Sbjct: 17  LGQSEAFLAFQEELSRVAKVDRPVLLVGERGTGKELAAARLHFLSRRWQGPFVILDGASL 76

Query: 66  SEGLIDSELFGHESGSFTGAKGRHQGRFERAEGGTLFLDELATAPLSVQEKLLRVIEYGQ 125
           S  L ++ELFGHE+G+FTGA  R  GRFERA+GGTLFLDE    PLSVQ+KLLRV+EYGQ
Sbjct: 77  SPSLAEAELFGHEAGAFTGAAMRRPGRFERADGGTLFLDEAGNLPLSVQDKLLRVVEYGQ 136

Query: 126 YERVGGNQVLNANVRLVCATNANLPQMAQQGTFRADLLDRLAFDVIHLPALRHRPEDIAL 185
           YERVGG Q L A+VR+V ATNA+LP + +QG FRADLLDRLAF V+HLP LR R +D+ L
Sbjct: 137 YERVGGTQRLEADVRIVAATNADLPGLVRQGRFRADLLDRLAFCVLHLPPLRARGDDVLL 196

Query: 186 LAEHFAIRMCRELQLPLFVGFSPNALHQLQAYSWPGNVRELKNVVERAV----------- 234
           LAEHFA R   E  LP    FS  A   L  Y+WPGN+REL+N +ER V           
Sbjct: 197 LAEHFATRFAMEAGLP-EPEFSTQARRALLTYAWPGNIRELRNTIERCVLKAEGGIITAL 255

Query: 235 --------YQHG---------LNSQPIDQLVFNPFQSSDIVTDES--EQVDVRHTTRTDF 275
                   +QHG         +++         P  + DI   ++  +  D    T T  
Sbjct: 256 DTTPFASPWQHGPAVHADATAVSTPAGGGATPGPASAPDIDPADTAMQHGDSGTATTTPT 315

Query: 276 HLPLDYKAWQQ---------QCDIELLQAALTQAKFNQKHAAQLLGLSYHQFRGMMRKY 325
               + +AW Q           + + L+ AL + + N++ AA+LLGL+Y QFRG+ R++
Sbjct: 316 ASSPNPQAWTQGTTLPDAVRHLEEDALRGALARTRHNRRAAAELLGLTYDQFRGLYRRH 374