Pairwise Alignments

Query, 338 a.a., phage shock protein operon transcriptional activator from Vibrio cholerae E7946 ATCC 55056

Subject, 466 a.a., Fis family transcriptional regulator from Burkholderia phytofirmans PsJN

 Score =  207 bits (526), Expect = 6e-58
 Identities = 126/321 (39%), Positives = 173/321 (53%), Gaps = 17/321 (5%)

Query: 5   LLGESPAFLAVLDKVSRLAPIDRPVLVIGERGTGKELIAQRLHYLSKRWEQPLVSLNCST 64
           +LG SPA   V D++ R+AP    V+++GE GTGKE+ AQ LH LS R +   +++NC  
Sbjct: 141 MLGNSPAMQEVYDQIGRVAPTAASVMLVGESGTGKEVAAQTLHQLSLRRKHAFLAVNCGA 200

Query: 65  LSEGLIDSELFGHESGSFTGAKGRHQGRFERAEGGTLFLDELATAPLSVQEKLLRVIEYG 124
           +S  LI+SE+FGHE GSFTGA  +H+G FERA GGTLFLDE+   P+ +Q KLLRV+E G
Sbjct: 201 ISPNLIESEMFGHERGSFTGADRQHKGYFERANGGTLFLDEITEMPIELQVKLLRVLETG 260

Query: 125 QYERVGGNQVLNANVRLVCATNANLPQMAQQGTFRADLLDRLAFDVIHLPALRHRPEDIA 184
            + RVG  + +  +VRL+ ATN +  Q   +G  R DL  RL    I LP LR R +D+ 
Sbjct: 261 MFMRVGTTKEIETDVRLIAATNRDPEQAVLEGKLRLDLYHRLNVFPISLPPLRERGKDVE 320

Query: 185 LLAEHFAIRMCRELQLPLFVGFSPNALHQLQAYSWPGNVRELKNVVERAVYQHGLNSQPI 244
           LLA+ F   +           F       L +Y WPGNVRELKN V+RA    G +S   
Sbjct: 321 LLAQAFLDELNERHSTKKH--FPAAVKDMLMSYPWPGNVRELKNYVQRAHIMSGADS--- 375

Query: 245 DQLVFNPFQSSDIVTDESEQVDVRHTTRTDFHLPLDYKAWQQQCDIELLQAALTQAKFNQ 304
           D     P Q    +T          T        + +     + D +L+ A L Q    +
Sbjct: 376 DSTATVPLQ----ITLSKPAAGTAIT--------IPFGTSLAEADRQLILATLEQCGGVK 423

Query: 305 KHAAQLLGLSYHQFRGMMRKY 325
             AA++LG+S       + +Y
Sbjct: 424 TRAAEILGISLKTLYNRLVEY 444