Pairwise Alignments

Query, 222 a.a., phage shock protein PspA from Vibrio cholerae E7946 ATCC 55056

Subject, 257 a.a., membrane-associated 30 kD protein-like from Synechococcus elongatus PCC 7942

 Score =  129 bits (325), Expect = 4e-35
 Identities = 73/218 (33%), Positives = 121/218 (55%), Gaps = 1/218 (0%)

Query: 1   MGIFSRFADIVNSNISALLDKAEDPEKMIRLIIQEMEDTLVEVRTNSAKAMADKKELARK 60
           MG+F R + +V +N++ ++ KAEDPEK++   + +M++ L+++R   A A+A +K + ++
Sbjct: 1   MGLFDRISRVVRANMNDMVSKAEDPEKILEQALMDMQEDLIQLRQAVATAIAGQKRIEQQ 60

Query: 61  VESIEQQLEDWQNKATLALTKQREDLARAALIEKQKLQHVLKGLHTEQMLVEETIEKLTG 120
           +   + Q   WQ +A LAL K +EDLAR AL  K+        L T+       ++ L  
Sbjct: 61  MNQAQTQAASWQQRAQLALQKGQEDLARQALSRKKTFNETAVALKTQLDQQAGQVDTLKR 120

Query: 121 EIGKLETKITETRAKQQALAIRSQAASHRRDVQRHLHAGRTEEAMAKFEQFSRKVDELEA 180
            +  LE KI E + K+  L  R+QAA  +  +Q  +    T  +MA FE+   KV  +EA
Sbjct: 121 NLVALEGKIAEAKTKKDMLKARAQAAKAQEQLQSAVGRLSTNTSMAAFERMEEKVLSMEA 180

Query: 181 EADLYAQSGQARSLEQEFAELQAQDEIEKELNKLKAQM 218
           +A   A+      LE +F  L+A  ++E EL  +KAQ+
Sbjct: 181 KAQASAELA-GTDLESQFVSLEAGGDVEDELAAMKAQL 217