Pairwise Alignments

Query, 343 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 398 a.a., RND family efflux transporter, MFP subunit from Dechlorosoma suillum PS

 Score =  114 bits (284), Expect = 6e-30
 Identities = 81/288 (28%), Positives = 138/288 (47%), Gaps = 6/288 (2%)

Query: 52  TTAAGDRAVLAFRVPGQLQTIDVLAGQEVKKGEVLARLNPDEYALLEQQASANFQLADVQ 111
           T  + +  VL     G++ +I    G  V KG VL  L+        QQA AN  LA   
Sbjct: 76  TLRSNESVVLRPETAGRIASIGFKDGVPVAKGTVLVALDAATQEAELQQAKANHALAVTN 135

Query: 112 FQRAQRLRQDKVVSEQDFDQAQANHNSAKATWEQAKANLRYTQLIAPYDGTISLIPAEQY 171
           F+R + L   K +S+Q  D   AN    +A    A+A L  T++ AP+ G + +      
Sbjct: 136 FKRTEELLAKKFISQQSLDTTAANLKVQEAAVALAEAKLAKTRIRAPFAGVVGIREVSVG 195

Query: 172 EYVAAKQGVMNIQTNQLLKVQFLLPDHLLNRFSRDGVEAHMVFDSFPNRQYPLQFQEIDT 231
           +YV     ++N++  + LK+ F LP+  L+R  + G    +  D+ PN+ +      +D 
Sbjct: 196 DYVKEGADLINLEDIRTLKLDFRLPELYLSRLQK-GQAVEVSVDALPNQAFKAVLDAVDP 254

Query: 232 EADSKTRSYKVTMVMERPNDVGILPGMAGRVSLM-APSGSATVIPTSALFAEQGGKYVWR 290
             D+  R+  +   ++ P ++ + PGM  RV L+        +IP  A+ +  G + V+R
Sbjct: 255 LVDANGRAISLRARLDNP-ELKLRPGMFARVRLLFGNRDGVLMIPEQAIVSGGGKQTVFR 313

Query: 291 VDDA---GLVSKAAVTLNEQRQVLTGLNDGDRIIISGVSGVTEGIKVR 335
           +++     +  K  +  N Q ++L+GL  GDRII +G   V +G  V+
Sbjct: 314 IEEGKAKKVEVKTGLRRNAQVEILSGLAAGDRIITAGQLKVQDGSPVK 361