Pairwise Alignments

Query, 343 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 364 a.a., efflux transporter, RND family, MFP subunit from Marinobacter adhaerens HP15

 Score =  101 bits (252), Expect = 3e-26
 Identities = 75/281 (26%), Positives = 140/281 (49%), Gaps = 11/281 (3%)

Query: 61  LAFRVPGQLQTIDVLAGQEVKKGEVLARLNPDEYALLEQQASANFQLADV--QFQRAQRL 118
           L   V G++  +++  G+ V +G+VL RL+ D  A  + Q     QLAD   Q +RAQRL
Sbjct: 70  LTTEVSGRVVELNLETGRRVGQGDVLLRLD-DRQAWADLQV-IEAQLADARRQLERAQRL 127

Query: 119 RQDKVVSEQDFDQAQANHNSAKATWEQAKANLRYTQLIAPYDGTISLIPAEQYEYVAAKQ 178
           R +  +S+   DQ + + + A+A  + A+  L   ++ AP+ G + L       Y+ A  
Sbjct: 128 RSNNSISQSQVDQLRTSVDVAEAQRQSAQVRLENHRIEAPFAGVVGLSDISVGAYITAGT 187

Query: 179 GVMNIQTNQLLKVQFLLPDHLLNRFSRDGVEAHMVFDSFPNRQYPLQFQEIDTEADSKTR 238
            V  + T   +++ F +P+  L + S  G E      ++P++ +  Q  E+ +     +R
Sbjct: 188 SVTTLDTTDRMELGFSIPERFLGQVSL-GQEVRGASPAYPDQTFSGQLVELGSRVSELSR 246

Query: 239 SYKVTMVMERPNDVGILPGMAGRVSLMAPSGSATVIPTSALFAEQGGKYVWRVDDAGLVS 298
           S  V  +++ P+ + + PG     +L      A VIP  A+      +YV+  +D G+  
Sbjct: 247 SLPVRALIDNPDGL-LRPGQFMSATLTLRQRQALVIPEQAVMIRGDEQYVFVAED-GVAR 304

Query: 299 KAAVTLNEQR----QVLTGLNDGDRIIISGVSGVTEGIKVR 335
           + +V+L  +     +V +GL+  D +I++G   ++ G +VR
Sbjct: 305 RVSVSLGSRMPGFVEVSSGLSQEDPVIVTGQDRLSSGDRVR 345