Pairwise Alignments

Query, 343 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 414 a.a., multidrug transporter subunit MdtA from Klebsiella michiganensis M5al

 Score = 89.4 bits (220), Expect = 2e-22
 Identities = 77/308 (25%), Positives = 133/308 (43%), Gaps = 25/308 (8%)

Query: 52  TTAAGDRAVLAFRVPGQLQTIDVLAGQEVKKGEVLARLNPDEYALLEQQAS-------AN 104
           T  A +   +  RV GQL  I    GQ+VK G++LA ++P ++ +   QA        A 
Sbjct: 78  TVTAANTVTVRSRVDGQLLAIHFTEGQQVKAGDLLAEIDPSQFKVALAQAEGQLAKDRAT 137

Query: 105 FQLADVQFQRAQRLRQDKVVSEQDFD-------QAQANHNSAKATWEQAKANLRYTQLIA 157
              A     R Q+L +  +VS Q+ D       + Q    + +A    A+  L ++++ A
Sbjct: 138 LANARRDLARYQQLVKTNLVSRQELDTQQSLVSETQGTIKADEAAVASAQLQLNWSRITA 197

Query: 158 PYDGTISLIPAEQYEYVAA--KQGVMNIQTNQLLKVQFLLPDHLLNRFSRDGVEAHMVFD 215
           P DG + L   +    +++    G++ +     + V F LP++ +    +       +  
Sbjct: 198 PIDGRVGLKQVDIGNQISSGDTTGIVVLTQTHPIDVVFTLPENQIATVVQAQKAGKKLVV 257

Query: 216 SFPNRQYPLQFQE-----IDTEADSKTRSYKVTMVMERPNDVGILPGMAGRVSLMAPSGS 270
              +R    +  E     +D + D+ T + K+       +D            L+    +
Sbjct: 258 EAWDRTNKQKISEGSLLSLDNQIDATTGTIKLKARFTNLDDALFPNQFVNARMLVDTEQN 317

Query: 271 ATVIPTSALFAEQGGKYVWRVDDAGLVSKAAVTLNEQRQ----VLTGLNDGDRIIISGVS 326
           A VIPT+AL     G +VW ++D   VSK  VT   Q      +  GL+ GDR++  G+ 
Sbjct: 318 AVVIPTAALQMGNEGHFVWVLNDENKVSKHTVTPGIQDSLKVVINAGLSAGDRVVTDGID 377

Query: 327 GVTEGIKV 334
            +TEG KV
Sbjct: 378 RLTEGAKV 385