Pairwise Alignments

Query, 343 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 361 a.a., membrane protein from Klebsiella michiganensis M5al

 Score =  145 bits (365), Expect = 2e-39
 Identities = 102/362 (28%), Positives = 177/362 (48%), Gaps = 20/362 (5%)

Query: 1   MNKTLLAFSICSTLLVGCGKELPPVPEPDSRPAKLTTVSVGNNTFSRQFPATTAAGDRAV 60
           MN+      +   +   C ++ P +  P  R  K+  V    ++  R FPA   +GD   
Sbjct: 1   MNRYFSLIPLVILITTACDRKAPQIT-PLPRMVKVAEVVAIGDSQQRVFPARIESGDSTD 59

Query: 61  LAFRVPGQLQTIDVLAGQEVKKGEVLARLNPDEYALLEQQASANFQLADVQFQRAQRLRQ 120
           L+F+  GQ++++DV  G  + +G+ LARL+  E      +      LA  QF R Q L  
Sbjct: 60  LSFKRGGQIESLDVRQGAAITQGQPLARLSAREAQQRVNERQTAATLAQRQFDRFQTLAG 119

Query: 121 DKVVSEQDFDQAQANHNSAKATWEQAKANLRYTQLIAPYDGTISLIPAEQYEYVAAKQGV 180
            + +S+ + D  +AN ++A A  + A+  L    L AP+ G  + +P   ++ VAA Q +
Sbjct: 120 RQAISKAEMDIQRANRDAANAALKIAREELSQMTLTAPFSGVAAYVPVRNHQVVAAGQPI 179

Query: 181 MNIQTNQLLKVQFLLPDHLLNRFSRDGVEAHMV--FDSFPNRQYPLQFQEIDTEADSKTR 238
           + +    LL V F +P++L         +   V   ++ P+RQ+  +++E    +DS T 
Sbjct: 180 VTLTRTDLLDVVFSVPENLFTALDIRNAQYRPVVKINAMPDRQFTAEYKEHTGSSDSSTL 239

Query: 239 SYKVTMVMERPNDVGILPGMAGRV-----SLMAPSG-SATVIPTSALF----AEQGGKYV 288
           ++++ + M RP D   + G++G V     +L A +G +A V+P  A+F      +   +V
Sbjct: 240 TWQIILTMPRPADFPAVGGVSGTVTINLANLPASAGKNAVVVPVEAVFNPDNRPRNDPHV 299

Query: 289 WRVDDAGLVSK------AAVTLNEQRQVLT-GLNDGDRIIISGVSGVTEGIKVREWVKER 341
           W V  +G   K          +  Q  V+T GL+ G+R++ +GVS +     VR W +ER
Sbjct: 300 WVVQGSGDQLKLEERQVGVGQVTSQGVVITEGLSVGERVVAAGVSELHAQQPVRIWTRER 359

Query: 342 GL 343
           GL
Sbjct: 360 GL 361