Pairwise Alignments

Query, 343 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 382 a.a., RND family efflux transporter MFP subunit from Klebsiella michiganensis M5al

 Score = 89.4 bits (220), Expect = 1e-22
 Identities = 87/340 (25%), Positives = 152/340 (44%), Gaps = 25/340 (7%)

Query: 15  LVGCGKELPPVPEPDSRPAKLTTVSVGNNTFSRQFPATTAAGDRAVLAFRVPGQLQTIDV 74
           LVGCG +    P P +RP +   +       S +      A D   L+FR  G++ T  V
Sbjct: 41  LVGCGDKSGDKPAP-ARPVRYVVIGSPATLPSLERTGEIHAHDETALSFRTAGRMMTRAV 99

Query: 75  LAGQEVKKGEVLARLNP-------DEYALLEQQASANFQLADVQFQRAQRLRQDKVVSEQ 127
             G  V  G++LA L+        D     E+ A A  ++A +   R Q+L     ++  
Sbjct: 100 DIGDRVNYGQLLATLDDTSAQNQLDSATADEESARATARVAALNVSRMQKLIATGAIARS 159

Query: 128 DFDQAQANH-------NSAKATWEQAKANLRYTQLIAPYDGTISLIPAEQYEYVAAKQGV 180
             D A+A+         S++A    A+ +L +T+L +P +G I+ + A   + V A + V
Sbjct: 160 QLDSARADWLVASARVKSSEAALRNARESLGWTRLTSPGEGIITAVSASPGQVVNAGETV 219

Query: 181 MNIQTNQLLKVQFLLPDHLLNRFSR-DGVEAHMVFDSFPNRQYPLQFQEIDTEADSKTRS 239
           + +   Q   V F +PD       R +  +  ++ D+  N    L  ++I  +AD +TR+
Sbjct: 220 VTLAAGQARDVVFDIPDPAKVEAQRAEEFQVALLSDAGVNAFAIL--RDISPQADPQTRT 277

Query: 240 YKVTMVMERPNDVGILPGMAGRVSLMAPSGSATVIPTSALFAEQGGKYVWRVDDAGLVSK 299
           ++V   +++P    +  G +  V L +   +   +P SAL +  G K    V    + ++
Sbjct: 278 WRVRATLKKP-PAAMALGSSVTVRLPSSGSAGYAVPASAL-SRCGEKPAVFVITPQMQAQ 335

Query: 300 AAVTLNEQRQ-----VLTGLNDGDRIIISGVSGVTEGIKV 334
             V +          + +GL  GDR+I +GVS +  G KV
Sbjct: 336 LRVVVPASYTASSVIIASGLMPGDRVITAGVSKLRPGEKV 375