Pairwise Alignments

Query, 343 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 355 a.a., efflux RND transporter periplasmic adaptor subunit from Phocaeicola vulgatus CL09T03C04

 Score = 97.4 bits (241), Expect = 5e-25
 Identities = 81/306 (26%), Positives = 139/306 (45%), Gaps = 14/306 (4%)

Query: 36  TTVSVGNNTFSRQFPATTAAGDRAVLAFRVPGQLQTIDVLAGQEVKKGEVLARLNPDEYA 95
           T VS    TF  QFP    A     LAFRV G +  I V  G  V++G++LA L+P +Y 
Sbjct: 36  TVVSADKQTFL-QFPGKVKAAQDISLAFRVSGTISKIHVKDGARVQEGQLLAELDPTDYQ 94

Query: 96  LLEQQASANFQLADVQFQRAQRLRQDKVVSEQDFDQAQANHNSAKATWEQAKANLRYTQL 155
           +      A +Q    + +R   L +D   +    D+A        A ++  K  L YT+L
Sbjct: 95  VQLDATEAEYQQIKAEAERVMALYKDNGTTPNANDKAVYGLKQITAKYKHHKDQLAYTRL 154

Query: 156 IAPYDGTISLIPAEQYEYVAAKQGVMNIQTNQLLKVQFLLP-DHLLNRFSRDGVEAHMVF 214
            AP++G +     E +E + A   V+ + +    +V+  LP    + R   D    H  F
Sbjct: 155 YAPFNGYVQKRLFEAHETIGAGMPVIAMISGGTPEVEINLPAAEYIRREQFDNY--HCTF 212

Query: 215 DSFPNRQYPLQFQEIDTEADSKTRSYKVTMVMERPNDVGILPGMAGRVSLMAPSGSATV- 273
           D +P   YPL+   +  +A++  + Y + + +         PGM   V+++  +      
Sbjct: 213 DIYPGETYPLKLISVTPKANA-NQLYTMRLQVVPGTRAIPSPGMNTMVTILCRTEQENTL 271

Query: 274 -IPTSALFAEQGGKYVWRV-DDAGLVSKAAVT----LNEQRQVLTG--LNDGDRIIISGV 325
            +PT A+  ++G  YV+     +  V +  V+    LN    ++T   L+ G++I+ SGV
Sbjct: 272 SVPTGAILQKEGKAYVFVFHPSSNTVHRQEVSILRLLNNGHSLITSRQLHPGEQIVSSGV 331

Query: 326 SGVTEG 331
             + +G
Sbjct: 332 HHIEDG 337