Pairwise Alignments

Query, 369 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 371 a.a., efflux RND transporter periplasmic adaptor subunit from Rhodopseudomonas palustris CGA009

 Score = 96.7 bits (239), Expect = 9e-25
 Identities = 84/366 (22%), Positives = 160/366 (43%), Gaps = 36/366 (9%)

Query: 17  TAWLAHLLLIAGCSEPT-------KLERDTLPRVKVAQAGEKVSDKLFFPAVANAAERSH 69
           +A +A  L++ GC   T       K  R   P + V    E+ +    F A    +  S 
Sbjct: 9   SAIIAMALILGGCDSATPKPDRGGKEPRKAQPVMVVPVRFEEGARTRTFAATIRPSIESD 68

Query: 70  LSFRVAGEISKFHVKEGARVKQGDILAEIEPTDYRLAVDNAQARFSVIDSQY-------R 122
           L FR++G++++  V+ G  V+ G  L  ++  D RL  + A+A      S          
Sbjct: 69  LGFRISGKVARRLVRTGDLVRSGQALLTLDTNDLRLQREQAEAEVKAAQSNLIQAEADEG 128

Query: 123 RSQPLVEKGLLAKSQFDEIAAQRQIARAEL-------ELAKLRLSFTQLRAPMDGIISRV 175
           R+  L  KG +A +   +  A  + AR+ L       +LA   L +  L A  DG+I+  
Sbjct: 129 RAVELQSKGWMANAALQKAHATAEEARSRLIRAQRALDLAGHALGYATLEADADGVITAT 188

Query: 176 SAEQFESVQVGQQIVNIHNIDSVEVLIQLPDRLYATQPTASELAKIETVVRVPSGQVYPA 235
             E  + +  GQ  V +  +  +E ++ LP+        AS    + ++     G+ Y A
Sbjct: 189 PIEPGQVISAGQAAVRLARLSELEAVVALPESYVERVGRASASLSLWSL----PGKTYDA 244

Query: 236 RIKEFTTEPDPATGTFTVTLSLPMPEQELILDGMAVEVSAKGQHVGLNPLNTISIPIEAI 295
           R++E +   D AT TF     +P  + ++ + GM+  ++ + Q    +      +P+ A+
Sbjct: 245 RLRELSFAADLATRTFAARFVIPGADDKVRI-GMSATLTLREQ----DERRFARLPLTAV 299

Query: 296 FNADGDELDKTAQYVWLLNNDNTVSKRQVRLAKASRSHVQVSEGINAGDRLVVAGVARLR 355
           +N            V+++ +   + +R V + +    +V V+ G++ G+ +V  GV +L 
Sbjct: 300 YN------HGRGAAVFVVGDGGELHERPVTIERYEDRNVLVTSGVSDGETVVALGVEKLD 353

Query: 356 DGMKVQ 361
             + V+
Sbjct: 354 PALTVR 359