Pairwise Alignments

Query, 369 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 362 a.a., efflux RND transporter periplasmic adaptor subunit from Rhodopseudomonas palustris CGA009

 Score =  110 bits (276), Expect = 5e-29
 Identities = 99/364 (27%), Positives = 168/364 (46%), Gaps = 38/364 (10%)

Query: 19  WLAHLLLI------AGCSEPTKLERD-TLPRVKVAQAGEKVSDKLFFPAVANAAERSHLS 71
           WL  ++L+      AGC E  + ER  T+ +  V     + S  +       A   + LS
Sbjct: 8   WLRPVVLLMVAASLAGCGEEARRERPVTMVKTAVVHTQPR-STVIRLTGDVQARVSTELS 66

Query: 72  FRVAGEISKFHVKEGARVKQGDILAEIEPTDYRLAVDNAQARFSVIDSQ-------YRRS 124
           FRV+G + +  V  GA V  GD+LA ++PT+ R  +  AQA  +  ++Q       Y R 
Sbjct: 67  FRVSGRVVERLVDVGAHVNAGDLLARLDPTEQRADLVGAQAALTAAEAQLRLATATYERQ 126

Query: 125 QPLVEKGLLAKSQFDEI-----AAQRQI--ARAELELAKLRLSFTQLRAPMDGIISRVSA 177
           + L+  G   +  +D+      AA+  +  A+A+L +AK  L +T+LRA   GII+  + 
Sbjct: 127 KTLMASGFTTRVAYDQAQEGLRAAEGSVDTAKAQLGIAKDALGYTELRASAAGIITARNI 186

Query: 178 EQFESVQVGQQIVNIHNIDSVEVLIQLPDRLYATQPTASELAKIETVVRVPSGQVYPARI 237
           E  +  Q  Q    +    + + +  + + ++   P  S+  K+  V +     V  A+ 
Sbjct: 187 EVGQVAQSAQSAYTLAEDGARDAVFDVYEAIFLI-PVGSDSIKLSLVSKPAITAV--AKP 243

Query: 238 KEFTTEPDPATGTFTVTLSLPMPEQELILDGMAVEVSAKGQHVGLNPLNTISIPIEAIFN 297
           +E +   DP TG+  V LS+  P  E+ L  + V             L+ I +P  A+  
Sbjct: 244 REISPTVDPKTGSVRVKLSIENPPPEMTLGSVVVGEGFS------QTLDKIVLPWSAL-- 295

Query: 298 ADGDELDKTAQYVWLLN-NDNTVSKRQVRLAKASRSHVQVSEGINAGDRLVVAGVARLRD 356
                 D++   VW+++   +TVS + V + +     + VS G++ GDR+VV G   LR 
Sbjct: 296 ----TADQSGAAVWVVDPKTHTVSLKSVAIERYETDAIVVSRGLSIGDRVVVDGGKMLRP 351

Query: 357 GMKV 360
           G  V
Sbjct: 352 GQVV 355