Pairwise Alignments

Query, 369 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 361 a.a., membrane protein from Klebsiella michiganensis M5al

 Score =  136 bits (342), Expect = 1e-36
 Identities = 96/362 (26%), Positives = 177/362 (48%), Gaps = 13/362 (3%)

Query: 15  RYTAWLAHLLLIAGCSEPTKLERDTLPR-VKVAQA---GEKVSDKLFFPAVANAAERSHL 70
           RY + +  ++LI    +    +   LPR VKVA+    G+  S +  FPA   + + + L
Sbjct: 3   RYFSLIPLVILITTACDRKAPQITPLPRMVKVAEVVAIGD--SQQRVFPARIESGDSTDL 60

Query: 71  SFRVAGEISKFHVKEGARVKQGDILAEIEPTDYRLAVDNAQARFSVIDSQYRRSQPLVEK 130
           SF+  G+I    V++GA + QG  LA +   + +  V+  Q   ++   Q+ R Q L  +
Sbjct: 61  SFKRGGQIESLDVRQGAAITQGQPLARLSAREAQQRVNERQTAATLAQRQFDRFQTLAGR 120

Query: 131 GLLAKSQFDEIAAQRQIARAELELAKLRLSFTQLRAPMDGIISRVSAEQFESVQVGQQIV 190
             ++K++ D   A R  A A L++A+  LS   L AP  G+ + V     + V  GQ IV
Sbjct: 121 QAISKAEMDIQRANRDAANAALKIAREELSQMTLTAPFSGVAAYVPVRNHQVVAAGQPIV 180

Query: 191 NIHNIDSVEVLIQLPDRLYATQPTASELAKIETVVRVPSGQVYPARIKEFTTEPDPATGT 250
            +   D ++V+  +P+ L+      +   +    +     + + A  KE T   D +T T
Sbjct: 181 TLTRTDLLDVVFSVPENLFTALDIRNAQYRPVVKINAMPDRQFTAEYKEHTGSSDSSTLT 240

Query: 251 FTVTLSLPMPEQELILDGMAVEVSAKGQHVGLNP-LNTISIPIEAIFNADGDELDKTAQY 309
           + + L++P P     + G++  V+    ++  +   N + +P+EA+FN   D   +   +
Sbjct: 241 WQIILTMPRPADFPAVGGVSGTVTINLANLPASAGKNAVVVPVEAVFNP--DNRPRNDPH 298

Query: 310 VWLLNNDN---TVSKRQVRLAKASRSHVQVSEGINAGDRLVVAGVARLRDGMKVQV-LEE 365
           VW++        + +RQV + + +   V ++EG++ G+R+V AGV+ L     V++   E
Sbjct: 299 VWVVQGSGDQLKLEERQVGVGQVTSQGVVITEGLSVGERVVAAGVSELHAQQPVRIWTRE 358

Query: 366 RG 367
           RG
Sbjct: 359 RG 360