Pairwise Alignments

Query, 369 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 398 a.a., RND transporter MFP subunit from Cupriavidus basilensis FW507-4G11

 Score =  102 bits (254), Expect = 2e-26
 Identities = 88/355 (24%), Positives = 155/355 (43%), Gaps = 31/355 (8%)

Query: 26  IAGCSEPTKLERDTLP-RVKVAQAGEKVSDKLFFPAVANAAERSHLSFRVAGEISKFHVK 84
           +AGCS   +   +  P R+   Q G   ++  F   V    E S L FRV G+I+   V 
Sbjct: 49  LAGCSREAEKAPEIRPVRLMQLQPGVGKTEVEFSGDVRPRIE-SRLGFRVGGKIAARLVD 107

Query: 85  EGARVKQGDILAEIEPTDYRLAVDNAQARF-------SVIDSQYRRSQPLVEKGLLAKSQ 137
            GA V++G  LA ++PTD  LA   ++A++        + ++  +R   L  K  ++ ++
Sbjct: 108 VGATVRRGQPLARLDPTDLGLAEAGSRAQYDAAKTDRDLAEADLKRYNELFAKKFISAAE 167

Query: 138 -------FDEIAAQRQIARAELELAKLRLSFTQLRAPMDGIISRVSAEQFESVQVGQQIV 190
                  FD  A++ + A A L     + ++  L A  DG+++ + AE  + V  GQ +V
Sbjct: 168 QQRRQATFDSAASRLRQAEAGLRNQSNQTAYGVLAADADGVVTLIEAEVGQVVAAGQSVV 227

Query: 191 NIHNIDSVEVLIQLPDRLYATQPTASELAKIETVVRVPSGQVYPARIKEFTTEPDPATGT 250
            +      EV + LP+         S+   +        G+  P  ++E +   DP T T
Sbjct: 228 RVAQTAEKEVAVGLPEDQVERLRGISD---VTVRTWAEPGRALPGHVREISPMADPVTRT 284

Query: 251 FTVTLSLPMPEQELILDGMAVEVSAKGQHVGLNPLNTISIPIEAIFNADGDELDKTAQYV 310
           +   +S+P P  +      AV    +           + +P+ A+    G      +  V
Sbjct: 285 YAARISVPNPPADFKFGMTAVVTFTRTSDDA-----ALRVPLSALLQKQG------SNQV 333

Query: 311 WLLN-NDNTVSKRQVRLAKASRSHVQVSEGINAGDRLVVAGVARLRDGMKVQVLE 364
           W+ +     V    V L +   + +QV +G++ G  +V AGV  L+ G KV+ L+
Sbjct: 334 WVYDAATGAVQPVNVTLGELQGNEIQVRQGLSPGQTIVTAGVHLLKPGQKVKPLQ 388