Pairwise Alignments

Query, 1037 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1026 a.a., Cation efflux system protein from Pseudomonas fluorescens FW300-N2E2

 Score =  562 bits (1449), Expect = e-164
 Identities = 326/1019 (31%), Positives = 549/1019 (53%), Gaps = 10/1019 (0%)

Query: 22   VAAYFINNRVISWMVSLIFLIGGTAAFFNLGRLEDPAFTIKDAMVVTSYPGATPQQVEEE 81
            ++A  +  R I+  +  +  + GT AFF LGR EDP FT+K   V+T++PGAT ++++++
Sbjct: 5    LSALAVRERAITVFLIFLIAVAGTLAFFKLGRAEDPPFTVKQLTVITAWPGATAREMQDQ 64

Query: 82   VTYPLEKAIQQLTYVDEVNSISSRGLSQITVTMKNNYGPDDLPQIWDELRRKVNDLKGAL 141
            V  PLEK +Q+L + D   + +  GL+   V++ +   P  + + + + R+K++D    L
Sbjct: 65   VAEPLEKRLQELKWYDRSETYTRPGLAFTMVSLLDRTPPSQVQEEFYQARKKLDDEATKL 124

Query: 142  PPGVNPPLVIDDFGDVYGILLAVTGEGYSYKELLDYVDYLRRELELIDGVSKVSVSGQQQ 201
            P GV  PLV D++ DV   L A+  +G   + L+   + LR+ L  + GV KV++ G+Q 
Sbjct: 125  PAGVIGPLVNDEYSDVTFALFALKAKGEPQRLLVRDAEVLRQRLLHVAGVKKVNIIGEQA 184

Query: 202  EQVFIEISMKRISTLGISPQTVFNLLSTQNLVSDAGAIRIGSEYIRIHPTGEFDDVEKLG 261
            E++FI  S  R++TLG+SPQ +F  L++QN+++ AG+I      + +   G FD +EK+ 
Sbjct: 185  ERIFISFSHDRLATLGVSPQDIFAALNSQNVLTPAGSIETKGPQVFLRVEGAFDTLEKIR 244

Query: 262  DLILSERGAQGLIYLRDVAEVKRGYVEVPSNVITFNGKLALNVGVSFAQGVNVVEVGQRF 321
            D  L+ +G    + L DVA V+RGY +  + ++  NG+ AL +GV   +G N +++G+  
Sbjct: 245  DTPLTIQGR--TLKLSDVATVERGYEDPATFLVRNNGEEALLLGVIMREGWNGLDLGKAL 302

Query: 322  DRRLAELKYQQPIGIDIAEVYSQPKEVDKSVSGFVVSLGQAVAIVIIVLLFFMGLRSGLL 381
            D   +++    P+G+ + +V  Q   +D +V  F+V    A+ +V++V    MG R G++
Sbjct: 303  DAETSKINEDMPLGMTLTKVTDQAVNIDSAVGEFMVKFFVALLVVMLVCFLSMGWRVGVV 362

Query: 382  IGLILLLTVLGTFIFMQYFKIDLQRISLGALVIALGMLVDNAIVVVEGILIGTQKGRTRL 441
            +   + LT+   F+ M     +  RI+LG+L++ALG+LVD+AI+ +E +++  ++G  R+
Sbjct: 363  VAAAVPLTLAIVFVVMAATGKNFDRITLGSLILALGLLVDDAIIAIEMMVVKMEEGYDRI 422

Query: 442  QAATDIVTQTKWPLLGATVIAVTAFAPIGLSEDATGEYCGTLFTVLLISLMLSWFTAISL 501
            +A+    + T  P+L  T++    F P G ++   GEY   +F ++ I+L+ SW  A++ 
Sbjct: 423  KASAYAWSHTAAPMLSGTLVTAIGFMPNGFAQSTAGEYTSNMFWIVGIALIASWVVAVAF 482

Query: 502  TPFFADLFFRGQKAPASGEESDPYQGFIFVVYRRFLEFCMRRAWLTMGVLVLGLAASLYG 561
            TP+         K P  G  +  Y    +  +R+ L   +   WL  G ++     ++ G
Sbjct: 483  TPYLGMKMLPDIK-PVEGGHAAIYNTRHYNRFRQVLARVISHKWLVAGTVITLFVVAVLG 541

Query: 562  FTKVKQAFFPSSTTPMFMVDVWMPEGTDIRATDAILLELEKWLSAQESVDSVTTTAGKGL 621
               VK+ FFP+S  P  MV+V MP GT I  T A   ++E WL  Q     VT   G+G 
Sbjct: 542  MGLVKKQFFPTSDRPEVMVEVQMPYGTSIEQTSAATAKVEAWLQKQAEAKIVTAYIGQGA 601

Query: 622  QRFMLTYSPEKSYAAYGEITTRVTDYQQLAALMARFRAHLDARY-PQINYKLKQIELGPG 680
             RF L  +PE    ++ +I       +    L  R R  + A   P+   +  QI  GP 
Sbjct: 602  PRFFLAMAPELPDPSFAKIVVLTDSQEARETLKFRLREAVAAGLAPEARVRATQIVFGPY 661

Query: 681  GGAKIEARIVGSDPTVLRSIAAQVMDVMYADPGAYNIRHDWRERTKVLEPQFNESQARRY 740
                +  R++G DPT LR IAA+V DVM A P    +  DW      L    ++ + +  
Sbjct: 662  SPFPVAYRVMGPDPTKLREIAARVQDVMQASPMMRTVNTDWGPLVPTLHFNLDQDRLQAV 721

Query: 741  GITKADVDEFLAMSFSGKTIGVYRDGTTLMPIVARLPEEERVDIRNIEGMKIWSPALSEY 800
            G+T + V E L    +G  I   R+    + +V R   + R+D   IEG  +   A  + 
Sbjct: 722  GLTSSAVAEQLQFLLAGVPITAVREDIRSVQVVGRAAGDIRLDPARIEGFTLVG-AAGQR 780

Query: 801  IPLQQVTLGYEMRWEDPLIVRKNRKRMLTVMAD--PDLLGEETAATLQQRLQPQIEAIPL 858
            IPL QV    ++R EDP++ R++R   +TV  D    L   + ++ +   LQP ++   L
Sbjct: 781  IPLSQVG-EVDVRMEDPILRRRDRTPTITVRGDIAEGLQPPDVSSAMLVLLQPILDT--L 837

Query: 859  PPGYFLEWGGEYESSGDAKASLFKTMPLGYLFMFLITVFLFNSVKESLIVWLTVPLAVIG 918
            P GY ++  G  E SG A  ++   +P+      LI +    S+   L+V+LT PL +IG
Sbjct: 838  PDGYRIQQAGAIEESGKANQAILPLLPIMVALTLLIIIVQVRSISAMLMVFLTAPLGLIG 897

Query: 919  VTTGLLALNTPFGFMALLGFLSLSGMLLKNGIVLLDQIEIEMHSGKDPYLAVVDASLSRV 978
            V   LL    PFG  AL+G ++LSG+L++N ++L+ QI      G DP+ AV++A++ R 
Sbjct: 898  VVPMLLIFQQPFGINALVGLIALSGILMRNTLILIGQIHHNAQEGLDPFNAVIEATVQRA 957

Query: 979  RPVCMAAVTTILGMIPLLPDIFFRPMAVTIMFGLGFATVLTLIVVPVLYRLFHHVKVPQ 1037
            RPV + A+  IL  IPL   +F+  +A T++ G    T++TL+ +P +Y ++  ++  Q
Sbjct: 958  RPVLLTALAAILAFIPLTHSVFWGTLAYTLIGGTFVGTLMTLVFLPAMYSIWFKIRPVQ 1016