Pairwise Alignments
Query, 1037 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056
Subject, 1054 a.a., Heavy metal efflux pump CzcA from Pseudomonas syringae pv. syringae B728a
Score = 280 bits (717), Expect = 3e-79
Identities = 259/1067 (24%), Positives = 475/1067 (44%), Gaps = 92/1067 (8%)
Query: 25 YFINNRVISWMVSLIFLIGGTAAFFNLGRLEDPAFTIKDAMVVTSYPGATPQQVEEEVTY 84
+ I R++ + L+ G A++ L P T + TS PG +P + E+ +T+
Sbjct: 8 FAIEQRIVVMLAVLLMAGLGIASYQKLPIDAVPDITNVQVQINTSAPGFSPLETEQRITF 67
Query: 85 PLEKAIQQLTYVDEVNSISSRGLSQITVTMKNNYGPDDLPQIWDELRRKVNDLKGALPPG 144
+E + L + + S+S GLSQ+TV ++ DL + ++ K LP G
Sbjct: 68 AIETNMAGLPGLQQTRSLSRSGLSQVTVIFEDG---TDLFFARQLVNERLQIAKDQLPEG 124
Query: 145 VNPPL--VIDDFGDVY-------GILLAVTGEGYSYKELLDYVDYL-RRELELIDGVSKV 194
V+ + + G+++ L G Y+ +L D++ + +L + GV+++
Sbjct: 125 VDTMMGPISTGLGEIFLWTVEAREGALKEDGTPYTPTDLRVIQDWIIKPQLRNVPGVAEI 184
Query: 195 SVSGQQQEQVFIEISMKRISTLGISPQTVFNLLSTQNLVSDAGAIRIGSEYIRIHPTGEF 254
+ G Q I K+++ ++ + L N AG I G E + I G+
Sbjct: 185 NTIGGFARQYQIAPDPKKLAAYKLTLNDLVAALERNNANVGAGYIERGGEQLLIRAPGQL 244
Query: 255 DDVEKLGDLILSERGAQGL-IYLRDVAEVKRGYVEVPSNVITFNGKLALNVGVSFAQGVN 313
V+ + +++++ QG I + VAEV G E+ S T NG+ + V G N
Sbjct: 245 GTVDDIANIVIAN--VQGTPIRISSVAEVGIGK-EMRSGAATENGREVVLGTVFMLIGEN 301
Query: 314 VVEVGQRFDRRLAELKYQQPIGIDIAEVYSQPKEVDKSVSGFVVSLGQAVAIVIIVLLFF 373
V Q +LAE+ P G++ VY + V+K+++ +L + +VI++L F
Sbjct: 302 SRTVSQAVAAKLAEINRTLPQGVEAVTVYDRTTLVEKAIATVKKNLIEGAILVIVILFLF 361
Query: 374 MG-LRSGLLIGLILLLTVLGTFIFMQYFKIDLQRISLGALVIALGMLVDNAIVVVEGI-- 430
+G +R+ L+ +++ L +L TF M K+ +SLGAL G++VD A+V+VE
Sbjct: 362 LGNIRAALITAMVIPLAMLFTFTGMFTNKVSANLMSLGAL--DFGIIVDGAVVIVENAIR 419
Query: 431 -LIGTQKGRTRLQAATD-------IVTQTKWPLLGATVIAVTAFAPIGLSEDATGEYCGT 482
L Q+ R+ ++ + + PL+ +I + + PI G+
Sbjct: 420 RLAHAQQKHGRMLTRSERFHEVFAAAREARRPLIFGQLIIMVVYLPIFALTGVEGKMFHP 479
Query: 483 LFTVLLISLMLSWFTAISLTPFFADLFFRGQKAPASGEESDPYQGFIFVVYRR----FLE 538
+ ++I+L+ + +++ P +F G+ EE +GF+ R+ L
Sbjct: 480 MAFTVVIALLGAMILSVTFVPAAIAMFVTGKVK----EE----EGFVMRTARQRYAPILS 531
Query: 539 FCMRRAWLTMGVLVLGLAASLYGFTKVKQAFFPSSTTPMFMVDVWMPEGTDIRATDAILL 598
+ + + G+ + + S + +++ F PS + F + GT + + +
Sbjct: 532 WVLGHRSIAFGMAFVLIVLSGFTASRMGSEFIPSLSEGDFALQALRVPGTSLTQSVDMQQ 591
Query: 599 ELEKWLSAQESVDSVTTT-AGKGLQRFMLTYSPEKSYAAYGEIT-------------TRV 644
LEK + E V V A G P +Y + T +
Sbjct: 592 RLEKAII--EKVPEVQRVFARTGTAEIAADPMPPNISDSYVMLKPQSEWPDPDKSRETLI 649
Query: 645 TDYQQLAALMARFRAHLDARYPQINYKLKQI------ELGPGGGAKIEARIVGSDPTVLR 698
D Q+ AA + P NY+L Q EL G + + ++ G D VL
Sbjct: 650 ADLQKAAASV-----------PGSNYELSQPIQLRFNELVSGVRSDVAVKVFGDDMNVLN 698
Query: 699 SIAAQVMDVMYADPGAYNIRHDWRERTKVLEPQFNESQARRYGITKADVDEFLAMSFSGK 758
AA++ + PGA ++ + VL + +A RYG+ ADV + +A++ G+
Sbjct: 699 QTAAKIAATLQKVPGASEVKVEQTTGLPVLTINIDRDKAARYGLNVADVQDAIAIALGGR 758
Query: 759 TIGVYRDGTTLMPIVARLPEEERVDIRNIEGMKIWSPALS---------EYIPLQQVTLG 809
G +G +V RL E+ R D+ + + I PA++ +I L QV
Sbjct: 759 QAGTLYEGDRRFDMVVRLSEQLRTDVDGLSSLLIPVPAVTGSSAGNQQISFIALSQVA-S 817
Query: 810 YEMRWEDPLIVRKNRKRMLTVMADPDLLGEETAATLQQRLQPQIEAIPLPPGYFLEWGGE 869
++ I R+N KR++ V A+ + G + + +++ + +P GY+ WGG+
Sbjct: 818 LDLVLGPNQISRENGKRVVIVSAN--VRGRDLGSFVEEAGTTIDNGVQIPAGYWTSWGGQ 875
Query: 870 YESSGDAKASLFKTMPLGYLFMFLITVFLFNSVKESLIVWLTVPLAVIGVTTGLLALNTP 929
+E A L +P+ L + + +FN++K+ L+V+ +P A+ G L + P
Sbjct: 876 FEQLQSAAKRLQIVVPVALLLVLALLFMMFNNLKDGLLVFTGIPFALTGGVMALWLRDIP 935
Query: 930 FGFMALLGFLSLSGMLLKNGIVLLDQIEIEMHSGKDPYLAVVDASLSRVRPVCMAAVTTI 989
A +GF++LSG+ + NG+V++ I G + A+ + +L+R+RPV M A+
Sbjct: 936 LSISAGVGFIALSGVAVLNGLVMIAFIRSLREQGHSLHDAINEGALTRLRPVLMTALVAS 995
Query: 990 LGMIPLLPDI-----FFRPMAVTIMFGLGFATVLTLIVVPVLYRLFH 1031
LG IP+ RP+A ++ G+ +T LTL+V+P LY+ H
Sbjct: 996 LGFIPMALATGTGAEVQRPLATVVIGGILSSTALTLLVLPALYQWAH 1042
Score = 42.4 bits (98), Expect = 2e-07
Identities = 60/274 (21%), Positives = 118/274 (43%), Gaps = 35/274 (12%)
Query: 784 IRNIEGMKIWSPALSEYIPLQQVTLGYEMRWEDPLIVRKNRKRMLTVMADPDLLGEETAA 843
I N++G I +++E V +G EMR R+ V+ +L E +
Sbjct: 255 IANVQGTPIRISSVAE------VGIGKEMR--SGAATENGRE---VVLGTVFMLIGENSR 303
Query: 844 TLQQRLQPQIEAI--PLPPGYFLEWGGEYESSG---DAKASLFKTMPLGYLFMFLITVFL 898
T+ Q + ++ I LP G +E Y+ + A A++ K + G + + +I
Sbjct: 304 TVSQAVAAKLAEINRTLPQG--VEAVTVYDRTTLVEKAIATVKKNLIEGAILVIVILFLF 361
Query: 899 FNSVKESLIVWLTVPLAVIGVTTGLLALNTPFGFMALLGFLSLSGMLLKNGIVLLD---- 954
+++ +LI + +PLA++ TG+ M+ LG L G+++ +V+++
Sbjct: 362 LGNIRAALITAMVIPLAMLFTFTGMFTNKVSANLMS-LGALDF-GIIVDGAVVIVENAIR 419
Query: 955 ------QIEIEMHSGKDPYLAVVDASLSRVRPVCMAAVTTILGMIPL-----LPDIFFRP 1003
Q M + + + V A+ RP+ + ++ +P+ + F P
Sbjct: 420 RLAHAQQKHGRMLTRSERFHEVFAAAREARRPLIFGQLIIMVVYLPIFALTGVEGKMFHP 479
Query: 1004 MAVTIMFGLGFATVLTLIVVPVLYRLFHHVKVPQ 1037
MA T++ L A +L++ VP +F KV +
Sbjct: 480 MAFTVVIALLGAMILSVTFVPAAIAMFVTGKVKE 513