Pairwise Alignments

Query, 1037 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1036 a.a., Cation/multidrug efflux protein from Sinorhizobium meliloti 1021

 Score =  555 bits (1431), Expect = e-162
 Identities = 322/1016 (31%), Positives = 547/1016 (53%), Gaps = 10/1016 (0%)

Query: 22   VAAYFINNRVISWMVSLIFLIGGTAAFFNLGRLEDPAFTIKDAMVVTSYPGATPQQVEEE 81
            ++A  +  R ++    ++    G  AF +LGR EDP+FTIK   V T +PGAT +++++ 
Sbjct: 5    LSALAVRERAVTLFFIVLLAAAGVYAFMSLGRAEDPSFTIKTLTVTTVWPGATAREMQDL 64

Query: 82   VTYPLEKAIQQLTYVDEVNSISSRGLSQITVTMKNNYGPDDLPQIWDELRRKVNDLKGAL 141
            V  PLEK IQ+LT+ D V + +  G + +TVT+K++  P  + + + + R+K+ D    L
Sbjct: 65   VAEPLEKRIQELTWYDRVETTTRPGYAFLTVTLKDSTPPTAVEEEFYQARKKLGDEARNL 124

Query: 142  PPGVNPPLVIDDFGDVYGILLAVTGEGYSYKELLDYVDYLRRELELIDGVSKVSVSGQQQ 201
            P GV  P V D++ DV   L A+  +G   +EL+   + +R++L  + GV K+++ G++ 
Sbjct: 125  PSGVFGPFVNDEYSDVSFALYALKAKGMPMRELVRQAEVIRQDLLHVPGVKKINILGERP 184

Query: 202  EQVFIEISMKRISTLGISPQTVFNLLSTQNLVSDAGAIRIGSEYIRIHPTGEFDDVEKLG 261
            EQ+F+E S  +++TLGIS Q +   L  QN V+ AG+I      + I   G ++ V+ + 
Sbjct: 185  EQIFVEFSYAKLATLGISAQDIAAALQRQNTVTPAGSIDTRGPQVFIRFDGAYNSVQAIA 244

Query: 262  DLILSERGAQGLIYLRDVAEVKRGYVEVPSNVITFNGKLALNVGVSFAQGVNVVEVGQRF 321
               +   G    + L D AEV+RGY +  + +I   G+ A+ +G    QG N +E+G+  
Sbjct: 245  ATPIVAAGR--TLKLSDFAEVRRGYEDPATYIIRHEGEPAIMLGAVMQQGWNGLELGKAL 302

Query: 322  DRRLAELKYQQPIGIDIAEVYSQPKEVDKSVSGFVVSLGQAVAIVIIVLLFFMGLRSGLL 381
            + R A +    P+G+ +A+V  Q   +D +V  F++    A+ +V++V L  +G R G++
Sbjct: 303  EERSAAIARTLPLGMTLAKVSDQAVNIDAAVGEFMLKFAMALGVVLLVSLLSLGWRVGIV 362

Query: 382  IGLILLLTVLGTFIFMQYFKIDLQRISLGALVIALGMLVDNAIVVVEGILIGTQKGRTRL 441
            + L + LT+   F+ M        RI+LGAL++ALG+LVD+AI+ +E +++  ++G  R+
Sbjct: 363  VALAVPLTLAVVFLIMLETGRFFDRITLGALILALGLLVDDAIIAIEVMVVKMEEGMDRI 422

Query: 442  QAATDIVTQTKWPLLGATVIAVTAFAPIGLSEDATGEYCGTLFTVLLISLMLSWFTAISL 501
            +AA    + T  P+L  T++ +    P+G +    GEY G +F V+  +L++SW  A+  
Sbjct: 423  KAAAYAWSHTAAPMLSGTLVTIIGLMPVGFARSTAGEYAGNIFWVVGFALIVSWVVAVIF 482

Query: 502  TPFFADLFFRGQKAPASGEESDPYQGFIFVVYRRFLEFCMRRAWLTMGVLVLGLAASLYG 561
            TP+         K P  G     Y    +   R  +EF +R  ++T  V+ + +A S+ G
Sbjct: 483  TPYLGVKMLPDIK-PVEGGHHAIYDTPNYRRLRGIIEFAVRHKYVTCAVVGIVMALSVVG 541

Query: 562  FTKVKQAFFPSSTTPMFMVDVWMPEGTDIRATDAILLELEKWLSAQESVDSVTTTAGKGL 621
               VK  FFP+S  P  +V+V MPEG  I  T A + +LE+WL  Q   D +T+  G+G 
Sbjct: 542  MGGVKHQFFPTSDRPEVLVEVRMPEGASIETTIATVEKLERWLQEQPEADILTSYIGQGA 601

Query: 622  QRFMLTYSPEKSYAAYGEITTRVTDYQQLAALMARFRAHL-DARYPQINYKLKQIELGPG 680
             RF    +PE    A+ +I     D     AL  R RA + D   P+   ++ Q+  GP 
Sbjct: 602  PRFFFAMAPELPDPAFAKIVVLTPDSHAREALKLRLRAAVSDGLVPEGYVRVTQLVFGPY 661

Query: 681  GGAKIEARIVGSDPTVLRSIAAQVMDVMYADPGAYNIRHDWRERTKVLEPQFNESQARRY 740
                +E RI+G DP  L  I+ + +++M   P       DW  RT VL    ++ +    
Sbjct: 662  TPFPVEFRIMGPDPAQLYQISEKALEIMKGVPDVRQANRDWGNRTPVLRFVPDQDRLNLI 721

Query: 741  GITKADVDEFLAMSFSGKTIGVYRDGTTLMPIVARLPEEERVDIRNIEGMKIWSPALSEY 800
            G++ A+  + + +  SG  +   R+    +P+VAR   E R+D   +    + S      
Sbjct: 722  GLSPAEAAQQMQLLLSGIPVTQVRENIRNVPVVARSAGESRLDPARLADFSLMSRD-GRQ 780

Query: 801  IPLQQVTLGYEMRWEDPLIVRKNRKRMLTVMADPDLLGE--ETAATLQQRLQPQIEAIPL 858
            +PL Q+    E+R+E+P++ R++R  ++T+ +D +   +  E +  +   LQP I ++P+
Sbjct: 781  VPLDQIGHS-EIRFEEPILKRRDRTPVITIRSDINEATQPPEVSQQIMTALQPLIASLPV 839

Query: 859  PPGYFLEWGGEYESSGDAKASLFKTMPLGYLFMFLITVFLFNSVKESLIVWLTVPLAVIG 918
              GY +E GG  E S  A  +L K  P     M ++ +    S+    +V LT PL + G
Sbjct: 840  --GYRIEMGGNIEESLKANVALVKIFPAMIAAMLIVIILQVRSLSTMTMVMLTAPLGLAG 897

Query: 919  VTTGLLALNTPFGFMALLGFLSLSGMLLKNGIVLLDQIEIEMHSGKDPYLAVVDASLSRV 978
            V   LL  N PFGF A+LG + L+G+L++N ++L +QI+    +G   Y AV++A++ R 
Sbjct: 898  VVPVLLLFNQPFGFNAILGLIGLAGILMRNTLILTEQIKENKAAGLHDYHAVIEATVQRT 957

Query: 979  RPVCMAAVTTILGMIPLLPDIFFRPMAVTIMFGLGFATVLTLIVVPVLYRLFHHVK 1034
            RPV + A+  +L  +PL   +F+  MA T++ G    TV+ L+ +P LY  +  +K
Sbjct: 958  RPVILTALAAVLAFVPLTHSVFWGSMAYTLIGGTAVGTVMILLFLPALYAAWFRIK 1013