Pairwise Alignments

Query, 1037 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1049 a.a., efflux protein from Sinorhizobium meliloti 1021

 Score =  504 bits (1299), Expect = e-146
 Identities = 306/1002 (30%), Positives = 541/1002 (53%), Gaps = 11/1002 (1%)

Query: 31   VISWMVSLIFLIGGTAAFFNLGRLEDPAFTIKDAMVVTSYPGATPQQVEEEVTYPLEKAI 90
            +  ++++LI + GG      +G+ EDP FT +  +V   +PGA+ Q++E++V   +E+ +
Sbjct: 23   IARFLLALIIITGGLG-LLRMGQREDPEFTFRVMVVQAVWPGASIQEMEDQVVNKIERKL 81

Query: 91   QQLTYVDEVNSISSRGLSQITVTMKNNYGPDDLPQIWDELRRKVNDLKGALPPGVNPPLV 150
            Q+  ++D V S +  G + ITV ++ +   D++   + ++R+KV D+   LP GV  P  
Sbjct: 82   QETPHLDFVRSYTRAGSAIITVQIEGDTNADEVADAFYQVRKKVGDIANELPEGVLGPYF 141

Query: 151  IDDFGDVYGILLAVTGEGYSYKELLDYVDYLRRELELIDGVSKVSVSGQQQEQVFIEISM 210
             D+FGD +  L +++G+G+SY EL  +    R  L    GV KV V G Q E+++I++S 
Sbjct: 142  NDEFGDTFITLHSISGDGFSYPELKRFAIEGRDMLLATPGVEKVVVLGDQPEKIYIDLSS 201

Query: 211  KRISTLGISPQTVFNLLSTQNLVSDAGAIRIGSEYIRIHPTGEFDDVEKLGDLILSERGA 270
            K ++  G++   + N ++ QN V  AG++  G+  +RI   G+   VE + +L L  R  
Sbjct: 202  KVLAERGLTFNDLRNAIAGQNNVDYAGSVDTGTRSVRISVEGDVTKVEDIRELRL--RAG 259

Query: 271  QGLIYLRDVAEVKRGYVEVPSNVITFNGKLALNVGVSFAQGVNVVEVGQRFDRRLAELKY 330
               I L D+A V  G  +  +    FNG  ++ +GV  A+G NV +VG+  +      + 
Sbjct: 260  DRTIRLGDIATVTSGLEDPYARKFRFNGHDSVQIGVVMAKGFNVTDVGKAVEATYDRFES 319

Query: 331  QQPIGIDIAEVYSQPKEVDKSVSGFVVSLGQAVAIVIIVLLFFMGLRSGLLIGLILLLTV 390
              P G+ + +V +QP+ V ++++ F  +L +A+ IV+IV    +G RSGL+I + + L +
Sbjct: 320  ALPYGVSVDQVSNQPEVVTEAITEFSHALIEALIIVLIVSFLSIGWRSGLVIAIAIPLVL 379

Query: 391  LGTFIFMQYFKIDLQRISLGALVIALGMLVDNAIVVVEGILIGTQKGRTRLQAATDIVTQ 450
              TF  M    IDLQRISLGAL+IALG+LVD+A++VVE +    ++G  ++ AA+   + 
Sbjct: 380  AATFAIMYELGIDLQRISLGALIIALGLLVDDAMIVVEMMERKLEEGLEKIDAASFAYSS 439

Query: 451  TKWPLLGATVIAVTAFAPIGLSEDATGEYCGTLFTVLLISLMLSWFTAISLTPFFADLFF 510
            T +P+L  T+I    F P+G +E   GEY  +LF V+ I+L++SWF A+  TP+   +  
Sbjct: 440  TAFPMLTGTLITTAGFIPVGFAESTAGEYVRSLFYVVGIALVVSWFVAVYFTPWLGYMIL 499

Query: 511  RGQKAPASGEESDPYQGFIFVVYRRFLEFCMRRAWLTMGVLVLGLAASLYGFTKVKQAFF 570
            +  +   +G   D +    +   R  + + +R   + + + +     SL+ F  + + FF
Sbjct: 500  K--QRHHAGTHHDVFDTRFYRRLRTTVGWAVRHRVVVLLMTLAIFVTSLWAFQFIPKNFF 557

Query: 571  PSSTTPMFMVDVWMPEGTDIRATDAILLELEKWLSAQESVDSVTTTAGKGLQRFMLTYSP 630
            P S+ P  +VD+W+PEGT I+  +     LE+ +   E    + T  G+G  RF L    
Sbjct: 558  PQSSRPEILVDLWLPEGTSIKEVEKQAKALEERMMDDEDKRFIATYIGEGAPRFFLPLDQ 617

Query: 631  EKSYAAYGEITTRVTDYQQLAALMARFRAHLDARYPQINYKLKQIELGPGGGAKIEARIV 690
            +     + ++     D      L+A+ R  L   +P I  K+ ++ LGP  G  ++ R++
Sbjct: 618  QLRNPNFAQLLVMAKDEPARERLIAKLRTILAEDFPSIRAKVDRLFLGPPTGWPVQMRVM 677

Query: 691  GSDPTVLRSIAAQVMDVMYADPGAYNIRHDWRERTKVLEPQFNESQARRYGITKADVDEF 750
            G D   +R IA QV      +P    I  DW E    ++   ++ +AR  GIT   + + 
Sbjct: 678  GPDREEVRRIADQVKTKFQENPMLGAIHDDWLEPVPAMKLVIDQDRARALGITSQRIRQM 737

Query: 751  LAMSFSGKTIGVYRDGTTLMPIVARLPEEERVDIRNIEGMKIWSPALSEYIPLQQVTLGY 810
            L  + SG  +  +RDG   + I+AR P   R  +  ++ + +       ++P+ Q+    
Sbjct: 738  LQAAMSGVPLDSFRDGEETVSIMAREPGGNRHLLSAVQSVYV-PTDFGGFVPVSQIAKVV 796

Query: 811  EMRWEDPLIVRKNRKRMLTVMAD-PD-LLGEETAATLQQRLQPQIEAIPLPPGYFLEWGG 868
             +  E  +  R++R   +TV    PD +   + A  L   L+   +   L PGY +E  G
Sbjct: 797  PV-MEQGIEWRRDRLPTITVRGTLPDGVQPNDVAMQLFDELKGLRDG--LAPGYKVEIQG 853

Query: 869  EYESSGDAKASLFKTMPLGYLFMFLITVFLFNSVKESLIVWLTVPLAVIGVTTGLLALNT 928
              E S +++AS+    P+  + + ++ +       ++++V  T PL +IG    LL    
Sbjct: 854  GAEDSAESQASIAAKAPIMLVVIVILLMVQLQHFGKAMLVLATGPLGIIGAAAALLISGA 913

Query: 929  PFGFMALLGFLSLSGMLLKNGIVLLDQIEIEMHSGKDPYLAVVDASLSRVRPVCMAAVTT 988
            PFGF+A+LG ++L G++++N I+L+DQI+ ++ +G +   A++ A++ R RP+ + A+T 
Sbjct: 914  PFGFVAILGVIALLGIIIRNSIILVDQIDQDIAAGMERSEAIIGAAVRRFRPIILTALTA 973

Query: 989  ILGMIPLLPDIFFRPMAVTIMFGLGFATVLTLIVVPVLYRLF 1030
            +L +IP+   +F+ P+A  +M G+  ATVLT++V+P  Y LF
Sbjct: 974  VLALIPISRGVFWGPLAYAMMGGILVATVLTILVLPAGYALF 1015