Pairwise Alignments

Query, 1037 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1022 a.a., acriflavin resistance protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  348 bits (892), Expect = 1e-99
 Identities = 268/1026 (26%), Positives = 484/1026 (47%), Gaps = 38/1026 (3%)

Query: 22   VAAYFINNRVISWMVSLIFLIGGTAAFFNLGRLEDPAFTIKDAMVVTSYPGATPQQVEEE 81
            + A+  N R+ +  ++L+ L+ G  A   L RLEDP  T + A V+T YPGA+ ++VE  
Sbjct: 2    IKAFVENGRLAALFIALL-LVAGLGAMSALPRLEDPHITNRYASVITHYPGASAERVEAL 60

Query: 82   VTYPLEKAIQQLTYVDEVNSISSRGLSQITVTMKNNYGPDDLPQIWDELRRKVNDLKGAL 141
            VT  LE  +++L  +  + S S  G+S I + +K++    D   +W   R  + D +  L
Sbjct: 61   VTEVLENQLRRLEELKLIQSTSRPGISVIQLELKDDITETD--PVWSRARDLMADSRTKL 118

Query: 142  PPGVNPPLVIDDFGDVYGILLAVT--GEGYSYKELLD-YVDYLRRELELIDGVSKVSVSG 198
            P G   P + D  G    ++L +   G G    ++L  Y   ++  L L+ G     + G
Sbjct: 119  PEGAANPTLDDQIGYANTVILGLAWRGGGEPRVDILGRYAKEMQSRLRLLPGTDFAHLYG 178

Query: 199  QQQEQVFIEISMKRISTLGISPQTVFNLLSTQNLVSDAGAIRIGSEYIRIHPTGEFDDVE 258
               E++ +E+   +++ L ++P  +  +LS  +    AG I        +  +GE D   
Sbjct: 179  APSEEILVELDGNKVNQLALTPGAIAQILSAADSKIAAGEIHNSHFRALVEVSGELDSQT 238

Query: 259  KLGDLILSERGAQGLIYLRDVAEVKRGYVEVPSNVITFNGKLALNVGVSFAQGVNVVEVG 318
            ++  + L    +  +I L DVA V R Y   P  +   +G+  + V         V +  
Sbjct: 239  RIRQVPLKVDASGQIIRLGDVARVSRQYKTPPDTLALLSGERGIMVSARMLNNTRVDKWL 298

Query: 319  QRFDRRLAELKYQQPIGIDIAEVYSQPKEVDKSVSGFVVSLGQAVAIVIIVLLFFMGLRS 378
             +    +AEL+   P  I++  ++ Q       +    ++L Q   I+++VL+  +GLR+
Sbjct: 299  AQVRGAVAELEAGMPANIEVQWLFEQESYTVTRLGELAMNLLQGFIIILLVLMLTLGLRN 358

Query: 379  GLLIGLILLLTVLGTFIFMQYFKIDLQRISLGALVIALGMLVDNAIVVVEGILIGTQKGR 438
              ++ L L LT L T   M+   + + ++S+  LV+ALG++VDNAIV+V+ I    Q+G+
Sbjct: 359  AFVVSLSLPLTALFTLACMRAVDLPIHQMSVTGLVVALGIMVDNAIVIVDAISQRRQEGQ 418

Query: 439  TRLQAATDIVTQTKWPLLGATVIAVTAFAPIGLSEDATGEYCGTLFTVLLISLMLSWFTA 498
             RL+A ++ +     PL G+T+  + AFAPI L   A GE+ G +   ++ +L  S+  +
Sbjct: 419  GRLEAVSNTLKHLWLPLAGSTITTILAFAPIVLMPGAAGEFVGGIAISVMFALAGSYLIS 478

Query: 499  ISLTPFFADLFFRGQKAPASGEESDPYQGF----IFVVYRRFLEFCMRRAWLTMGVLVLG 554
             +L    A     G+ +PAS        G     +   Y   L   ++R       L++G
Sbjct: 479  HTLIAGLA-----GRFSPASEGHDWRAHGIRMPKLAAAYEGLLGKVLKRP--LASALLIG 531

Query: 555  LAASLYGFT---KVKQAFFPSSTTPMFMVDVWMPEGTDIRATDAILLELEKWLSAQESVD 611
            L   L GF    ++ + FFP S   MF ++V++     +      +  ++K L   + ++
Sbjct: 532  L-LPLLGFMAAGRMTEQFFPPSDRDMFQIEVYLAPQVSLERCHITVAAMDKLLEQTDGIE 590

Query: 612  SVTTTAGKGLQRFMLTYSPEKSYAA-YGEITTRVTDYQQLAALMARFRAHLDARYPQINY 670
             +    G  +  F    +  +  AA Y +   +V D+    AL+   +  LD  +P+   
Sbjct: 591  RIDWVVGGNIPSFYYNITQRQQGAANYAQAMVKVRDFDTANALIPTLQRTLDKEFPEAQV 650

Query: 671  KLKQIELGPGGGAKIEARIVGSDPTVLRSIAAQVMDVMYADPGAYNIRHDWRERTKVLEP 730
             ++++E GP   A +E  + G     LR +  ++  ++ +     + R         ++ 
Sbjct: 651  LVRKLEQGPPFNAPVEMMVYGPSLEELRRLGDEIRAILASHDKVIHTRATLSPGAPKVQL 710

Query: 731  QFNESQARRYGITKADVDEFLAMSFSGKTIGVYRDGTTLMPIVARLPEEERVDIRNIEGM 790
              +E  +   G+T  D+   + M+ +G++ G   + T  +P+  RL +  R     +  +
Sbjct: 711  AVDEDASLMSGLTLTDIANQVQMATTGRSGGSILEQTESLPVRVRLDDSMREQQGRLAAI 770

Query: 791  KIWSPALSEYIPLQQVTLGYEMRWEDPLIVRKNRKRMLTVMA--DPDLLGEETAATLQQR 848
            ++ S A S  IPL  ++   ++      I R+N +R+ T+ A    D+L       +++R
Sbjct: 771  ELVSRAGSG-IPLSALS-HTQITVSRGAIPRRNGQRVNTLEAYIQTDVLPARVLGDVRER 828

Query: 849  LQPQIEAIPLPPGYFLEWGGEYESSGDAKASLFKTMPLGYLFMFLITVFLFNSVKESLIV 908
                I+A+PLPPGY +E GGE     +A  +L  ++ L    +    V  FNS + + I+
Sbjct: 829  ----IDALPLPPGYHIEVGGESAKRNEAVGNLLSSVALVITLLLATVVLSFNSFRLTGII 884

Query: 909  WLTVPLAVIGVTTGLLAL---NTPFGFMALLGFLSLSGMLLKNGIVLLDQIEIEMHSGKD 965
             L+   A      GLLA+   + PFGF  ++G L L G+ +   IV+L ++E    + + 
Sbjct: 885  LLS---AAQSAGLGLLAVYLFDYPFGFTVIIGLLGLMGLAINAAIVILAELEDVADARQM 941

Query: 966  PYLAVVDASLSRVRPVCMAAVTTILGMIPLL--PDIFFRPMAVTIMFGLGFATVLTLIVV 1023
                +V    S  R +    +TT+ G +PL+     F+ P AV I  G    T+L+L+ V
Sbjct: 942  TLQTLVKTVASCTRHITSTTITTVGGFLPLIIAGGGFWPPFAVAIAGGTVLTTLLSLVWV 1001

Query: 1024 PVLYRL 1029
            PV+YRL
Sbjct: 1002 PVMYRL 1007