Pairwise Alignments

Query, 1037 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1073 a.a., AcrB/AcrD/AcrF family protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  272 bits (695), Expect = 1e-76
 Identities = 279/1093 (25%), Positives = 499/1093 (45%), Gaps = 108/1093 (9%)

Query: 15   ENNENQGVA---AYFINNRVISWMVSLIFLIGGTAAFFNLGRLEDPAFTIKDAMVVTSYP 71
            EN +  G++   A       I+ +++L+ L+ G  A     + E+P   +  A V   +P
Sbjct: 4    ENLQQLGISGRIARAFQASAITPLLALLALLLGMFAVMVTPKEEEPQIDVTFADVFIPFP 63

Query: 72   GATPQQVEEEVTYPLEKAIQQLTYVDEVNSISSRG----LSQITVTMKNNYGPDDLPQIW 127
            GATP +VE  VT P E+ I ++  +D + S S       ++   V +K N   D +  ++
Sbjct: 64   GATPAEVEHLVTLPAEQVISEIKGIDTLYSFSQPDGALIIAIFEVGVKRN---DAIVALY 120

Query: 128  DELRRKVNDL-KGALPPGVNPPLV----IDDFGDVYGILLAVTGEGYSYKELLDYVDYLR 182
            +++   ++ L +GA   GV  PL+    IDD   +  + L    +  + ++L      L 
Sbjct: 121  NQIYSNMDKLPRGA---GVGEPLIKPRGIDDV-PIVSLTLWSEAQDITPEQLTHVARGLE 176

Query: 183  RELELIDGVSKVSVSGQQQEQVFIEISMKRISTLGISPQTVFNLLSTQNLVSDAGAIRIG 242
             EL+ I G  ++   GQ +  + + I    +S  G+S   +   LS  N +S    +   
Sbjct: 177  TELKRIPGTREIYTLGQHELVLNVRIDPAALSAYGLSYSDINRALSGNNQISMPVPLIQD 236

Query: 243  SEYIRIHPTGEF----DDVEKLGDLILSERGAQGL---IYLRDVAEV--KRGYVEVPSNV 293
            ++ I++  TG+F    +DV++L  ++   +GA G    +YL D+AEV  K          
Sbjct: 237  NQEIKVQ-TGQFLRRLEDVQEL--VVAVRQGADGYSEPVYLADLAEVTLKSDLPRAQVQH 293

Query: 294  ITFNGKL-ALNVGVSFAQGVNVVEVGQRFDRRLAELK---YQQPIGIDIAEVYSQPKEVD 349
            +T +G   A+ + +    G+N V++      R+  L+       +   ++  Y      D
Sbjct: 294  VTKDGSYPAVTLAIGKQTGMNAVDIADAVIERMGALENTLLPANVHATVSRNYGDTA-AD 352

Query: 350  KSVSGFVVSLGQAVAIVIIVLLFFMGLRSGLLIGLILLLTVLGTFIFMQYFKIDLQRISL 409
            KS +  +  L  A   V+I++LF MG+R  L++G+ +++T+  T      +   L R+SL
Sbjct: 353  KS-NTLIFKLIFATTAVVILVLFTMGMREALVVGIAIIITLALTLFASWAWGFTLNRVSL 411

Query: 410  GALVIALGMLVDNAIVVVEGILIGTQKGRTRLQAATDI-VTQTKWPLLGATVIAVTAFAP 468
             AL+ ++G+LVD+AIVVVE I      G+  L+    + V +   P + AT   + A  P
Sbjct: 412  FALIFSIGILVDDAIVVVENIHRHMSMGKRSLRELIPVAVDEVGGPTILATFTVIAALLP 471

Query: 469  IGLSEDATGEYCGTLFTVLLISLMLSWFTAISLTPFFADLFFRGQKAPASGEESD-PYQG 527
            +       G Y   +     + +++S   A  LTP+ +    +      + +E++ P+ G
Sbjct: 472  MAFVSGLMGPYMSPIPINASMGMLISLAVAFILTPWLSGKLLKAHPHEGTNQENESPHGG 531

Query: 528  FIFVVYRRFLEF--------CMRRAWLTMGVLVLGL---AASLYGFTKVKQAFFPSSTTP 576
                + R F             R+A L +G+ ++GL   A +L     V     P     
Sbjct: 532  EDPRMVRIFTRLIGPFLNGKAGRKARLGLGLAIIGLIMVAVALPVMQAVVLKMLPFDNKS 591

Query: 577  MFMVDVWMPEGTDIRATDAILLELEKWLSAQESVDSVTTTAG-------KGLQR-FMLTY 628
             F V V MPEGT    T  +L  L   L+  E V  +   AG        GL R + L  
Sbjct: 592  EFQVMVDMPEGTTFEETHKVLQALADELATVEEVQHMQLYAGTAAPMNFNGLVRHYFLRS 651

Query: 629  SPEKSYAAYGEITTRVTDYQQLA------ALMARFRAHLDARYPQINYKLKQIELGPGGG 682
            SPE      G+I   ++D +  +      AL  R       R+   N K+ ++  GP   
Sbjct: 652  SPE-----LGDIQVNLSDKKHRSRDSHSIALAVRGPLQEIGRHFGANVKVVEVPPGPPVW 706

Query: 683  AKIEARIVGSDPTVLRSIAAQVM-------DVMYADPGAYNIRHDWRERTKVLEPQFNES 735
            + I A + G +  + +  A  V+       DV+  D    + +H W+    VL    + S
Sbjct: 707  SPIVAEVYGPNEAMRQDAARNVLGVFNTTQDVVDMDIFLPSGQHKWQ----VL---IDRS 759

Query: 736  QARRYGITKADVDEFLAMSFSGKTIGVYRDGTTLMPIVARLPEEE--RVDIRNIEGMKIW 793
            +A   G++ A++ + +A S  G+ + V        P+  RL  EE  ++D+  I GM + 
Sbjct: 760  KAALLGVSYAEIVDLVATSVGGRDVSVLHLENQARPVPIRLQLEESSKLDLDAIMGMTLP 819

Query: 794  SP----ALSEYIPLQQVTLGYEMRWEDPLIVRKNRKRMLTVMAD------PDLLGE-ETA 842
                  A+SE + +++  +       D  I+ KN   M+ V+AD        L G  E A
Sbjct: 820  GSRGLVAISELVTIRKGVI-------DAPIIHKNLIPMVMVVADMAGPLDSPLYGMFEMA 872

Query: 843  ATLQ--QRLQPQIEAIPLPPGYF---LEWGGEYESSGDAKASLFKTMPLGYLFMFLITVF 897
            +T+   + +      +  P G     + W GE++ + +    +     +G + ++L+ V 
Sbjct: 873  STISDSEEMGYAQHYVNQPSGLTDVAVLWDGEWKITYETFRDMGIAYAVGMIAIYLLVVA 932

Query: 898  LFNSVKESLIVWLTVPLAVIGVTTGLLALNTPFGFMALLGFLSLSGMLLKNGIVLLDQIE 957
             F S    LI+   +PL VIGV  G       F   +++G ++L+G++++N I+L+D I 
Sbjct: 933  QFRSYLVPLIIMAPIPLTVIGVMPGHALFGAQFTATSMIGMIALAGIIVRNSILLVDFIN 992

Query: 958  IEMHSGKDPYLAVVDASLSRVRPVCMAAVTTILGMIPLLPDIFFRPMAVTIMFGLGFATV 1017
             E+  G     AV+ +   R +P+ + A+  ++G + +L D  F  +A++++FG+  +T+
Sbjct: 993  QEVERGVPFAQAVIHSGAVRAKPIMLTALAAMIGALFILDDPIFNGLAISLIFGIFISTL 1052

Query: 1018 LTLIVVPVLYRLF 1030
            LTL+V+PVLY  F
Sbjct: 1053 LTLVVIPVLYYSF 1065