Pairwise Alignments

Query, 1037 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1014 a.a., integral membrane protein, AcrB/AcrD/AcrF family from Phaeobacter inhibens DSM 17395

 Score =  812 bits (2097), Expect = 0.0
 Identities = 438/1010 (43%), Positives = 630/1010 (62%), Gaps = 12/1010 (1%)

Query: 22   VAAYFINNRVISWMVSLIFLIGGTAAFFNLGRLEDPAFTIKDAMVVTSYPGATPQQVEEE 81
            +A   IN  + +W++ L  L GG   F NLGRLEDPAFTIK A+V+T YPGA+ +QV  E
Sbjct: 3    IARGSINRPLYTWIIMLAALFGGIWGFLNLGRLEDPAFTIKQAVVITQYPGASAEQVALE 62

Query: 82   VTYPLEKAIQQLTYVDEVNSISSRGLSQITVTMKNNYGPDDLPQIWDELRRKVNDLKGAL 141
            V+ PLE AIQ++  V ++ S++  GLS+I V M++ +   +LP +W +LR ++ D    L
Sbjct: 63   VSEPLESAIQKMGEVKQITSMNQPGLSRIDVEMQDTFDGSELPALWTKLRSEIEDAARDL 122

Query: 142  PPGVNPPLVIDDFGDVYGILLAVTGEGYSYKELLDYVDYLRRELELIDGVSKVSVSGQQQ 201
            P GV+ P V D FGDV+G+  AVT EGY+  E  +   +LRREL  +DGV+ V ++G  +
Sbjct: 123  PEGVSTPFVNDGFGDVFGVFYAVTAEGYTDAERHELATFLRRELLAVDGVADVEIAGLPE 182

Query: 202  EQVFIEISMKRISTLGISPQTVFNLLSTQNLVSDAGAIRIGSEYIRIHPTGEFDDVEKLG 261
            E +F+E  M       I    V N L+T N V  AG +  G    R+      D V ++ 
Sbjct: 183  EAIFVEPKMAITVNQNIPIDAVSNALATANSVRSAGQVDNGPVQTRVSAPEGSDSVTEIA 242

Query: 262  DLILSERGAQGLIYLRDVAEVKRGYVEVPSNVITFNGKLALNVGVSFAQGVNVVEVGQRF 321
             L +  +G   +I + D+A+V RG V+ PS +I F+G  A  +G++     N+VEVGQR 
Sbjct: 243  GLTIGSQGE--VINIIDMADVHRGRVDDPSQIIRFDGVEAFTIGIAGLATENIVEVGQRV 300

Query: 322  DRRLAELKYQQPIGIDIAEVYSQPKEVDKSVSGFVVSLGQAVAIVIIVLLFFMGLRSGLL 381
            D RLAEL  Q P G+++  +Y Q   VD++ + F+V+L  +V IV+IVL  FMG R+ ++
Sbjct: 301  DARLAELDSQIPYGVELKPIYQQHVVVDQASNDFLVNLAMSVGIVVIVLAIFMGWRAAIV 360

Query: 382  IGLILLLTVLGTFIFMQYFKIDLQRISLGALVIALGMLVDNAIVVVEGILIGTQKGRTRL 441
            +G  LLLTV+GT +FM +F I+++RISLGAL+IA+GMLVDNAIVV EG+ I   +GR+  
Sbjct: 361  VGTTLLLTVVGTLMFMNFFSIEMERISLGALIIAMGMLVDNAIVVAEGMQISMARGRSSR 420

Query: 442  QAATDIVTQTKWPLLGATVIAVTAFAPIGLSEDATGEYCGTLFTVLLISLMLSWFTAISL 501
            +AA +   +T+ PLLGATVI + AFA IGLS D+TGE+  +LF V+ ISL+LSW  A++ 
Sbjct: 421  EAAHEAAAKTQIPLLGATVIGIMAFAGIGLSPDSTGEFMFSLFAVIGISLLLSWLLALTA 480

Query: 502  TPFFADLFFRGQKAPASGEESDPYQGFIFVVYRRFLEFCMRRAWLTMGVLVLGLAASLYG 561
            TP  A  FF+      SG++ D Y G +F  Y + L   ++  W  +  L+        G
Sbjct: 481  TPLLAHYFFK----QGSGDDHDAYSGILFRTYSKILRLSLKLRWFVVPGLIAITVLCFIG 536

Query: 562  FTKVKQAFFPSSTTPMFMVDVWMPEGTDIRATDAILLELEKWLSAQESVDSVTTTAGKGL 621
            F +VKQ FFP+S TP+F V   +P+G+ I  T   +   E+WL+ +  V++VTT  G+G 
Sbjct: 537  FGQVKQQFFPNSNTPLFFVHYKLPQGSSITTTSEHMRVFEEWLADRNDVETVTTFVGQGA 596

Query: 622  QRFMLTYSPEKSYAAYGEITTRVTDYQQLAALMARFRAHLDARYPQINYKLKQIELGPGG 681
             RFMLTY  E    +YG +  R T  + + AL A        R+P+  ++ K++  GPGG
Sbjct: 597  TRFMLTYDSEDPTPSYGHLIIRATSLEAIPALQADLEVFGQGRFPEGEFRTKRLVFGPGG 656

Query: 682  GAKIEARIVGSDPTVLRSIAAQVM-DVMYADPGAYNIRHDWRERTKVLEPQFNESQARRY 740
            GA IE R  G DP VLR +  + M  +  A P   ++R DWRE+   L+P +   +A+  
Sbjct: 657  GAPIEVRFAGPDPRVLRQLGEEAMLRLQQATPDILSVRQDWREQEITLKPIYATDRAQTA 716

Query: 741  GITKADVDEFLAMSFSGKTIGVYRDGTTLMPIVARLPEEERVDIRNIEGMKIWSPALSEY 800
            G+T+  + + L  S  G   GV+R+   L+PIV R  E       N+    ++S A  ++
Sbjct: 717  GVTREAIADALQFSTDGLRAGVFRERDRLIPIVLRRAEAGEY---NLMDQLVFSEAAGKF 773

Query: 801  IPLQQVTLGYEMRWEDPLIVRKNRKRMLTVMADPDLLGEETAATLQQRLQPQIEAIPLPP 860
            +PL+Q+  G ++  E+ L+ R++R   LTV A  D+  + TAA++  ++Q  IE I LP 
Sbjct: 774  VPLEQMVGGIDVVVENTLVHRRDRVPTLTVGA--DISADLTAASVFSQVQDTIEEIQLPA 831

Query: 861  GYFLEWGGEYESSGDAKASLFKTMPLGYLFMFLITVFLFNSVKESLIVWLTVPLAVIGVT 920
            GY +EWGGE+E+S DA ASL K +P+  L M LI+V LFN++++ +I+WL VP++V GV 
Sbjct: 832  GYTMEWGGEHENSADANASLGKQLPVTILIMVLISVLLFNAIRQPIIIWLLVPMSVNGVV 891

Query: 921  TGLLALNTPFGFMALLGFLSLSGMLLKNGIVLLDQIEIEMHSGKDPYLAVVDASLSRVRP 980
             GLL    PF F ALLG LSLSGML+KNGIVL+++I++    G+    A+V+AS+SR+RP
Sbjct: 892  IGLLGTGMPFTFTALLGLLSLSGMLIKNGIVLVEEIDLVRAEGRPLREAIVEASVSRLRP 951

Query: 981  VCMAAVTTILGMIPLLPDIFFRPMAVTIMFGLGFATVLTLIVVPVLYRLF 1030
            V +AAVTTILGM PLL D FF  MA+TIM GL FATVLTL+  PV Y +F
Sbjct: 952  VMLAAVTTILGMAPLLTDAFFVSMAITIMGGLAFATVLTLVAAPVFYLIF 1001