Pairwise Alignments

Query, 1037 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1024 a.a., acriflavin resistance protein (RefSeq) from Shewanella loihica PV-4

 Score = 1120 bits (2896), Expect = 0.0
 Identities = 551/1020 (54%), Positives = 768/1020 (75%), Gaps = 6/1020 (0%)

Query: 23   AAYFINNRVISWMVSLIFLIGGTAAFFNLGRLEDPAFTIKDAMVVTSYPGATPQQVEEEV 82
            A Y I ++V+SWM +L+ LIGG+ +F +LG+LE P FTIK+A+VVT+YPGA+P+QVEEEV
Sbjct: 4    AEYSITHKVVSWMFALLLLIGGSLSFMSLGQLEFPEFTIKEALVVTAYPGASPEQVEEEV 63

Query: 83   TYPLEKAIQQLTYVDEVNSISSRGLSQITVTMKNNYGPDDLPQIWDELRRKVNDLKGALP 142
            T PLE A+QQL  V  + SI+S GLSQI + M++ Y  + LPQIWD +RRKV+D +G+LP
Sbjct: 64   TLPLEDALQQLDGVKHITSINSAGLSQIQIEMEDKYDAEKLPQIWDLVRRKVSDTQGSLP 123

Query: 143  PGVNPPLVIDDFGDVYGILLAVTGEGYSYKELLDYVDYLRRELELIDGVSKVSVSGQQQE 202
             G   P VIDDFGDVYGILL ++G+GYS +EL +Y D+LRREL L+DG+ +V+++G   +
Sbjct: 124  SGAMTPQVIDDFGDVYGILLNLSGDGYSERELENYADFLRRELVLVDGIKRVNIAGIVDQ 183

Query: 203  QVFIEISMKRISTLGISPQTVFNLLSTQNLVSDAGAIRIGSEYIRIHPTGEFDDVEKLGD 262
            QV +EIS ++I+ LG++   ++ L+++QN+VS+AG+IR+G   IRIHPTGEFD VE L  
Sbjct: 184  QVVVEISTQKINALGLNQDYIYGLINSQNVVSNAGSIRVGDNRIRIHPTGEFDSVEALSR 243

Query: 263  LILSERGAQGLIYLRDVAEVKRGYVEVPSNVITFNGKLALNVGVSFAQGVNVVEVGQRFD 322
            L++S  G+  LIYL D+A + +   E PSN+    G +AL+VG++F+ GVNVV+VG+  +
Sbjct: 244  LVVSAPGSAKLIYLGDIANIYKAMDETPSNLYHSGGDMALSVGIAFSSGVNVVKVGEAVN 303

Query: 323  RRLAELKYQQPIGIDIAEVYSQPKEVDKSVSGFVVSLGQAVAIVIIVLLFFMGLRSGLLI 382
            +++  L  + P+G+ +  VY Q K VD++++GF+V+L +++AIVI VLL FMGLRSGLL+
Sbjct: 304  QKMMALSDELPVGMMLTTVYDQSKMVDQTINGFLVNLAESIAIVIGVLLIFMGLRSGLLM 363

Query: 383  GLILLLTVLGTFIFMQYFKIDLQRISLGALVIALGMLVDNAIVVVEGILIGTQKGRTRLQ 442
            GL+LLLT+LGTFI M+   I+LQ ISLGAL+IALGMLVDNAIVV EGI+IG ++G++RL+
Sbjct: 364  GLVLLLTILGTFIMMKVLNIELQIISLGALIIALGMLVDNAIVVTEGIIIGLKRGQSRLE 423

Query: 443  AATDIVTQTKWPLLGATVIAVTAFAPIGLSEDATGEYCGTLFTVLLISLMLSWFTAISLT 502
             A  ++TQT+WPLLGATVIA+ AFAPIGLS++ATGE+C +LF VLLISL +SW TA++LT
Sbjct: 424  TAKQVITQTQWPLLGATVIAIIAFAPIGLSDNATGEFCISLFLVLLISLFISWITAMTLT 483

Query: 503  PFFADLFFRGQKAPASGEESDPYQGFIFVVYRRFLEFCMRRAWLTMGVLVLGLAASLYGF 562
            PFF DL F+  + P    +SDPY+G++F +YR  L   MR   LT+ V++L L  S+ GF
Sbjct: 484  PFFCDLLFKDGEIPDEA-DSDPYKGWLFQLYRGSLSLAMRFRGLTLLVVLLALVGSVMGF 542

Query: 563  TKVKQAFFPSSTTPMFMVDVWMPEGTDIRATDAILLELEKWLSA-QESVD----SVTTTA 617
             +VK  FFP+S TP+F VDVWMPEG+DI+AT+A+L  +E+ L A QE  D    ++T+  
Sbjct: 543  GQVKNVFFPASNTPIFFVDVWMPEGSDIKATEALLGRIEQDLMAEQEKQDLGLVNITSVV 602

Query: 618  GKGLQRFMLTYSPEKSYAAYGEITTRVTDYQQLAALMARFRAHLDARYPQINYKLKQIEL 677
            G+G QRF+L Y PEK YAAYG++   +++ + L A M R    L   YP+  Y+ K +E 
Sbjct: 603  GQGAQRFVLPYVPEKGYAAYGQLLIEMSNLETLNAYMRRLEQDLVQHYPEAEYRFKYMEN 662

Query: 678  GPGGGAKIEARIVGSDPTVLRSIAAQVMDVMYADPGAYNIRHDWRERTKVLEPQFNESQA 737
            GP   AKIEAR  G DP VLR +A Q  ++  A+P A ++RH+WR +  ++ PQ   +QA
Sbjct: 663  GPSPAAKIEARFYGEDPEVLRQLAQQASEIFLAEPSATSVRHNWRNQVTLVRPQLALAQA 722

Query: 738  RRYGITKADVDEFLAMSFSGKTIGVYRDGTTLMPIVARLPEEERVDIRNIEGMKIWSPAL 797
            R  GI+K D+D  L  +FSGK +G+YR+ + L+PI+AR P +ER++  +I  +++WS   
Sbjct: 723  RETGISKQDLDNALLTNFSGKHVGLYRENSHLLPIIARAPADERLNADSISALQVWSTEN 782

Query: 798  SEYIPLQQVTLGYEMRWEDPLIVRKNRKRMLTVMADPDLLGEETAATLQQRLQPQIEAIP 857
            + ++P+ QV   +   WEDPLI+R++RKR+++V+ADP   G ETA ++ ++L+P++EAI 
Sbjct: 783  NVFVPISQVVSDFTTEWEDPLIMRRDRKRVISVLADPLNGGNETADSVFRKLRPKVEAIS 842

Query: 858  LPPGYFLEWGGEYESSGDAKASLFKTMPLGYLFMFLITVFLFNSVKESLIVWLTVPLAVI 917
            LP GY LEWGGEYE+S +A+ S+F ++PLGYL MFLITV LFNSV++ L++W TVPLA+I
Sbjct: 843  LPAGYELEWGGEYETSSEAQQSVFSSIPLGYLAMFLITVLLFNSVRQPLVIWFTVPLALI 902

Query: 918  GVTTGLLALNTPFGFMALLGFLSLSGMLLKNGIVLLDQIEIEMHSGKDPYLAVVDASLSR 977
            GV +GLL  + PF FMALLG LSL+GM++KNGIVL+DQI +E+  GKD Y AV D+S+SR
Sbjct: 903  GVVSGLLLFDAPFSFMALLGLLSLTGMIIKNGIVLVDQINLELSQGKDAYRAVFDSSVSR 962

Query: 978  VRPVCMAAVTTILGMIPLLPDIFFRPMAVTIMFGLGFATVLTLIVVPVLYRLFHHVKVPQ 1037
            VRPV MAA+TT+LGMIPLLPD FF  MA+TI+FGLGFA+VLTL+V+PV Y L   +KVP+
Sbjct: 963  VRPVLMAAITTMLGMIPLLPDAFFGSMAITIIFGLGFASVLTLVVLPVAYTLVFGIKVPK 1022