Pairwise Alignments

Query, 1037 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1067 a.a., cation/multidrug efflux pump from Dechlorosoma suillum PS

 Score =  628 bits (1620), Expect = 0.0
 Identities = 370/1038 (35%), Positives = 583/1038 (56%), Gaps = 45/1038 (4%)

Query: 31   VISWMVSLIFLIGGTAAFFNLGRLEDPAFTIKDAMVVTSYPGATPQQVEEEVTYPLEKAI 90
            V+ +MV+L  +  G  A+  LG+ EDP FT K  +V T++PGA+ Q+VE +VT  +EK +
Sbjct: 17   VLYFMVALTLV--GLLAYSKLGQSEDPPFTFKVMVVRTAWPGASAQEVERQVTEKIEKTL 74

Query: 91   QQLTYVDEVNSISSRGLSQITVTMKNNYGPDDLPQIWDELRRKVNDLKGALPPGVNPPLV 150
            Q + Y D + S S  G S I    K+      +P IW ++R+KV D++  LP G+  P  
Sbjct: 75   QSVPYADIIRSYSRPGESMIFFQAKDATPAAAVPDIWYQVRKKVGDMRYTLPKGIEGPTF 134

Query: 151  IDDFGDVYGILLAVTGEGYSYKELLDYVDYLRRELELIDGVSKVSVSGQQQEQVFIEISM 210
             D+FGDVYG L AV G+G+ Y EL    + +R EL  +  V+KV   G+Q+E+V+IE+S 
Sbjct: 135  NDEFGDVYGNLYAVVGDGFGYTELKRQAEAIRAELLRVKDVAKVDFFGEQKERVYIELSN 194

Query: 211  KRISTLGISPQTVFNLLSTQNLVSDAGAIRIGSEYIRIHPTGEFDDVEKLGDLILSERGA 270
             +++TLGI    V   L  QN V  AG+    SE+IRI  +G +DD+  L +  L   G 
Sbjct: 195  AKLATLGIDGAAVVAALQNQNAVLAAGSFDTPSEHIRIDVSGRYDDLTALRETRLRANGR 254

Query: 271  QGLIYLRDVAEVKRGYVEVPSNVITFNGKLALNVGVSFAQGVNVVEVGQRFDRRLAELKY 330
            +  + L D+A + RGY + P+  I + GK A+ +GVS A+G +++ +G   D  +A ++ 
Sbjct: 255  E--VRLGDIASIGRGYEDPPTQKIRYMGKEAVLIGVSMAKGGDIIRLGGGLDGAVASIQD 312

Query: 331  QQPIGIDIAEVYSQPKEVDKSVSGFVVSLGQAVAIVIIVLLFFMGLRSGLLIGLILLLTV 390
            + P+G+++  V SQP+ V +SV+ FV SL +AV IV+ V L  +GLR+G+++ + + + +
Sbjct: 313  RLPVGLELHTVSSQPQAVQRSVNEFVRSLIEAVIIVLGVSLLSLGLRTGIVVAITIPVVL 372

Query: 391  LGTFIFMQYFKIDLQRISLGALVIALGMLVDNAIVVVEGILIGTQKGRTRLQAATDIVTQ 450
              TF+FMQ F + L +ISLGAL++ALG+LVD+AI+ VE +    ++G  R +AA+     
Sbjct: 373  AITFLFMQIFGVGLHKISLGALILALGLLVDDAIIAVEMMATKMEQGWARAKAASFAYES 432

Query: 451  TKWPLLGATVIAVTAFAPIGLSEDATGEYCGTLFTVLLISLMLSWFTAISLTPF------ 504
            T  P+L  T++    F PI  +  ATGEY  ++F V +I+L++SW  A+   P+      
Sbjct: 433  TAMPMLSGTLVTAAGFLPIATAASATGEYTRSIFQVTVIALLISWVAAVLFVPYLGYKLL 492

Query: 505  --FADLFFRGQ---------------------KAPASGEESDPYQGFIFVVYRRFLEFCM 541
              FA      Q                     K P +  E D Y    +  +R  ++ C+
Sbjct: 493  PDFAHHRVAHQEPGRLSRWLMRRLPWLERWLHKEPHTHSEHDIYATPFYRRFRALVDACV 552

Query: 542  RRAWLTMGVLVLGLAASLYGFTKVKQAFFPSSTTPMFMVDVWMPEGTDIRATDAILLELE 601
            RR WL +G+ V    AS+ GF  V+Q FFP ST P  +VD+ + EG    A DA    LE
Sbjct: 553  RRRWLVIGITVGAFVASIVGFGLVQQQFFPDSTRPELIVDLRLAEGASWDAADAEAKRLE 612

Query: 602  KWLSAQESVDSVTTTAGKGLQRFMLTYS---PEKSYAAYGEITTRVTDYQQLAALMARFR 658
             WL+ Q  +D+V    G G  RF L      P+K++A +  +T    + + L + +    
Sbjct: 613  SWLAEQPGIDNVVAYVGTGSPRFYLPLDQQMPQKNFAQFVILTQGSPERETLRSKLIDLF 672

Query: 659  AHLDARYPQINYKLKQIELGPGGGAKIEARIVGSDPTVLRSIAAQVMDVMYADPGAYNIR 718
             H    +P +   + ++E GP  G  ++ R+ G D  VLR  A +V  VM A+P   N+ 
Sbjct: 673  EH---DFPSLRAAINRLENGPPVGFPVQFRVAGPDLNVLRGYAHEVAQVMRANPSLANVH 729

Query: 719  HDWRERTKVLEPQFNESQARRYGITKADVDEFLAMSFSGKTIGVYRDGTTLMPIVARLPE 778
             DW E  KV+    ++S+AR  G+T +D+   +  +  G+++  +RDG  L+ +  R  E
Sbjct: 730  LDWEEPAKVVRLTVDQSKARLLGVTSSDIANLINTALKGQSVTEFRDGAELVDVHLRGTE 789

Query: 779  EERVDIRNIEGMKIWSPALSEYIPLQQVTLGYEMRWEDPLIVRKNRKRMLTVMADPDLLG 838
             ER  +  +  + + + A  + +PL QV    E  +E+ ++ R+NR   +TV  +  + G
Sbjct: 790  MERRRLSLLPDLMLPTRA-GKAVPLSQVAT-LEYGFEEGIVWRRNRVPTITVRGN--IYG 845

Query: 839  EETAATLQQRLQPQIEAIP--LPPGYFLEWGGEYESSGDAKASLFKTMPLGYLFMFLITV 896
                  +  +++  +++I   LP GY LE GG  E S    AS+   +PL +L +  + +
Sbjct: 846  HMQGPVVSAQVEKSLQSIKASLPLGYTLEVGGAVEESAKGGASVAAGVPLFFLVVLTVLM 905

Query: 897  FLFNSVKESLIVWLTVPLAVIGVTTGLLALNTPFGFMALLGFLSLSGMLLKNGIVLLDQI 956
                S  +  +V LT PL ++GVT  LL  N PFGF+A+LG ++LSGM+++N ++L+DQI
Sbjct: 906  LQLQSFSKVAMVLLTAPLGLVGVTAFLLLFNKPFGFVAMLGTIALSGMIMRNSVILVDQI 965

Query: 957  EIEMHSGKDPYLAVVDASLSRVRPVCMAAVTTILGMIPLLPDIFFRPMAVTIMFGLGFAT 1016
            + +  +GK  + A+VD+++ R+RP+ + A   IL MIPL    FF PMAV IM GL  AT
Sbjct: 966  DQDEKAGKPRWEAIVDSTVRRLRPIVLTAAAAILAMIPLTRSAFFGPMAVAIMGGLTVAT 1025

Query: 1017 VLTLIVVPVLYRLFHHVK 1034
            +LTLI +P LY  +H VK
Sbjct: 1026 LLTLIFLPALYAAWHKVK 1043