Pairwise Alignments

Query, 1037 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1035 a.a., heavy metal efflux pump, CzcA family from Marinobacter adhaerens HP15

 Score =  281 bits (720), Expect = 1e-79
 Identities = 257/1039 (24%), Positives = 469/1039 (45%), Gaps = 47/1039 (4%)

Query: 22   VAAYFINNRVISWMVSLIFLIGGTAAFFNLGRLEDPAFTIKDAMVVTSYPGATPQQVEEE 81
            +  Y +NNR+++ + ++  ++ G  +F  L     P  T     V T+ PG +P  +E  
Sbjct: 5    IVNYALNNRLMTLVFAIAVIVAGIFSFQKLPVDAFPDATPTMVQVFTTSPGLSPVDIETL 64

Query: 82   VTYPLEKAIQQLTYVDEVNSISSRGLSQITVTMKNNYGPDDLPQIWDELRRKVNDLKGAL 141
            ++YP+E ++  +  +++V S S  GLS++T+  ++     D+      +  ++++ K  +
Sbjct: 65   ISYPVEISMYGIPKLEKVQSTSIFGLSRVTIYFEDG---TDIYFARRLVNERLSEAKRQI 121

Query: 142  PPGVNPPLVIDDFGDVYGILL----AVTGEGYSYKELLDYVDYL-RRELELIDGVSKVSV 196
            P G+  P +      +  IL+        E YS +E+    D++ + +L  + GV+ V  
Sbjct: 122  PEGMGEPELGPIASGLGRILMYSLETEDKEQYSLQEIRTIQDWIVKPQLRTVPGVTGVLS 181

Query: 197  SGQQQEQVFIEISMKRISTLGISPQTVFNLLSTQNLVSDAGAIRIGSEYIRIHPTGEFDD 256
             G + +Q  + I  + +    ++   +   L+  N    A  I  G E   +   G  D 
Sbjct: 182  IGGEVKQYQVNIDAQELQARNLTVSDIRGALTQNNRNVGASFITRGGEEYIVRGYGWVDS 241

Query: 257  ----VEKLGDLILSERGAQGLIYLRDVAEVKRGYVEVPSNVITFNGKLALNVGVSFAQGV 312
                +E + ++I+S+   +  IY++DVAEV  G   +       +G+ ++   V    G 
Sbjct: 242  GYEGIEDIQNIIVSKSEGESPIYVKDVAEVGLGPA-IRRGAEVSSGEESVGGYVMKLIGT 300

Query: 313  NVVEVGQRFDRRLAELKYQQPIGIDIAEVYSQPKEVDKSVSGFVVSLGQAVAIVIIVLLF 372
            N  +V +  + ++ +L    P G+ I   YSQ   V K++     +L +   +V++ L  
Sbjct: 301  NTSQVLEDVNAKIDDLNKSLPEGLKIEAYYSQADLVGKAIGTVEKALLEGSVLVLVFLYL 360

Query: 373  FMG-LRSGLLIGLILLLTVLGTFIFMQYFKIDLQRISLGALVIALGMLVDNAIVVVEGIL 431
            F+G +RS L++   L L+VL  FI M+   +    +SLG L I +GM+VD A+V++E I 
Sbjct: 361  FLGNVRSTLIVVATLPLSVLFAFIAMRMSGLSANLMSLGGLAIGIGMMVDGAVVMIENIF 420

Query: 432  IGTQKGRTR----LQAATDIVTQTKWPLLGATVIAVTAFAPIGLSEDATGEYCGTLFTVL 487
               ++        L+   +   +   P++ A  I +  F P+   +   G+    +   +
Sbjct: 421  RHLEERSDEKVSVLRLVGESAREVARPIVFAIGIIIIVFLPLFTLQGVEGKLFSPMAYTI 480

Query: 488  LISLMLSWFTAISLTPFFADLFFRGQKAPASGEESDPYQG-FIFVVYRRFLEFCMRRAWL 546
              +L+ +   A++L P  A L F+       G+  +P    F+  +Y+  +   ++   +
Sbjct: 481  SFALIGALLLALTLVPVLASLSFK-----MGGQHKEPKLVLFLNRLYKPVVNTVVKVPKI 535

Query: 547  TMGVLVLGLAASLYGFTKVKQAFFPSSTTPMFMVDVWMPEGTDIRATDAILLELEKWLSA 606
             MGV V+  A SL  F  +   F P+     F +   +P G  + +       ++   S 
Sbjct: 536  VMGVAVVAFAGSLLLFPYLGSEFVPTLREGTFQIRSTLPPGASLESAIKYGKRIQ---SV 592

Query: 607  QESVDSVTTTAGKGLQRFMLTYSPEKSYAAYGEITTRVTDYQQ----LAALMARFRAHLD 662
             +    VT T  + + R  +   PE        +  +  D  +       L +R    LD
Sbjct: 593  VDEFPEVTGTYAR-IGRAEVGGDPEPVNVVATLVNLKPLDQWREDVSYEDLQSRIAEALD 651

Query: 663  ARYPQINYKLKQI------ELGPGGGAKIEARIVGSDPTVLRSIAAQVMDVMYADPGAYN 716
             R P +   L Q       EL  G  A++ A I G D   L  I  +V  +    PGA +
Sbjct: 652  ERVPGLANNLSQPIQLRTDELLSGVQAQLVASIFGDDLDELGRIGREVAALANDVPGATD 711

Query: 717  IRHDWRERTKVLEPQFNESQARRYGITKADVDEFLAMSFSGKTIGVYRDGTTLMPIVARL 776
            +R       K +  + +     ++GI+  ++   +     GK+ G+  DG     I ARL
Sbjct: 712  VRAQQSAGKKQIVIRPDREVLAQFGISIDNLMSTVETGIGGKSAGLVFDGVRRFEIFARL 771

Query: 777  PEEERVDIRNIEGMKIWSPALSEYIPLQQVTLGYEMRWEDPLIVRKNRKRMLTVMADPDL 836
             E  R  I  I  + +   +  E IPL +V    EM      I R N  R   V  +  +
Sbjct: 772  QESYRGSIDEIRKLPLRGNS-GELIPLSRVA-DVEMYAGPKKISRSNASRRQYVQMN--V 827

Query: 837  LGEETAATLQQRLQPQIEAIPLPPGYFLEWGGEYESSGDAKASLFKTMPLGYLFMFLITV 896
             G +  + +Q       + + +PPGYF+E+GG++E+   A A L   +P+    +FL+  
Sbjct: 828  RGRDMGSVVQDLRNRIEKQVDMPPGYFVEFGGQFENQERAMARLAIVVPITLALIFLLLF 887

Query: 897  FLFNSVKESLIVWLTVPLAVIGVTTGLLALNTPFGFMALLGFLSLSGMLLKNGIVLLDQI 956
              F+S++ + ++++ VP AV G    L          A +GF+++ G+ + NG+V++  I
Sbjct: 888  SAFSSLRYAALIFMNVPFAVTGGIVALFVTGLYLSVPAAVGFIAVFGVAVLNGVVMVSYI 947

Query: 957  EIEMHSGKDPYLAVVDASLSRVRPVCMAAVTTILGMIPLL-----PDIFFRPMAVTIMFG 1011
                  G +   AV   +  R+RPV M A   ILG+IPLL          RP+A  ++ G
Sbjct: 948  NQLRDEGYEVIEAVKLGAQRRLRPVLMTASVAILGLIPLLLADGIGSNVQRPLATVVVGG 1007

Query: 1012 LGFATVLTLIVVPVLYRLF 1030
            L  +T+LTL+V+P +Y+ F
Sbjct: 1008 LITSTLLTLVVLPSVYQWF 1026