Pairwise Alignments

Query, 1037 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1024 a.a., ACR family transporter from Klebsiella michiganensis M5al

 Score =  490 bits (1262), Expect = e-142
 Identities = 315/1027 (30%), Positives = 529/1027 (51%), Gaps = 25/1027 (2%)

Query: 10   KQTPPENNENQGVAAYFINNRVISWMVSLIFLIGGTAAFFNLGRLEDPAFTIKDAMVVTS 69
            K+ P +N  N  ++A+ + N  +     L+ ++ G+ ++  L R EDPAFTIK A+V   
Sbjct: 2    KKAPSKNTFN--LSAWALENPQMVSFFMLLMMVIGSLSYTLLPRNEDPAFTIKTAVVSAQ 59

Query: 70   YPGATPQQVEEEVTYPLEKAIQQLTYVDEVNSISSRGLSQITVTMKNNYGPDDLPQIWDE 129
            +PGA+       VT  LEK +Q+  ++D + S +  G + I + ++++     +P IW +
Sbjct: 60   WPGASVTDTTHLVTDVLEKKLQETPWLDYIESETRAGQTVIYINLRDDTPAQKVPAIWYQ 119

Query: 130  LRRKVNDLKGALPPGVNPPLVIDDFGDVYGILLAVTGEGYSYKELLDYVDYLRRELELID 189
            +R+K+ D+  +LP G   P V D+F D YG + A   +GY+ +E+   V+ +RREL  + 
Sbjct: 120  IRKKMQDIAPSLPEGAQGPSVNDEFDDTYGTIYAFIPDGYTLREVRQQVETIRRELMSVP 179

Query: 190  GVSKVSVSGQQQEQVFIEISMKRISTLGISPQTVFNLLSTQNLVSDAGAIRIGSEYIRIH 249
             + K  + G+QQEQ+ I  S  R++ +G+S Q V + L  QN V  AG +R G E + I+
Sbjct: 180  DIGKTVLLGEQQEQIAIAFSPARLAGMGLSIQQVTDALRAQNAVVPAGVLRTGQEKMTIN 239

Query: 250  PTGEFDDVEKLGDLILSERGAQGLIYLRDVAEVKRGYVEVPSNVITFNGKLALNVGVSFA 309
             +G     E L  + L  R     + L D+A ++R   E PS     NG+ A+ + +S A
Sbjct: 240  VSGALRSEESLRAVTL--RINDRYLPLTDIATIERRAAEPPSAAYRVNGRPAVGLAISMA 297

Query: 310  QGVNVVEVGQRFDRRLAELKYQQPIGIDIAEVYSQPKEVDKSVSGFVVSLGQAVAIVIIV 369
               N++  G   + R++ +    P GI++ +V  Q   V  +VSGFV  L +AV IV+ V
Sbjct: 298  PTGNMLRFGATLNYRMSAIGAGLPHGIEMVKVADQSAVVSGAVSGFVRVLVEAVLIVLAV 357

Query: 370  LLFFMGLRSGLLIGLILLLTVLGTFIFMQYFKIDLQRISLGALVIALGMLVDNAIVVVEG 429
                +GLR+GL++   + L +  TF  M    I LQRISLGAL+IALG+LVD+A++ VE 
Sbjct: 358  SFVSLGLRAGLVVAAAIPLVLAMTFAGMMLAGIGLQRISLGALIIALGLLVDDAMIAVET 417

Query: 430  ILIGTQKGRTRLQAATDIVTQTKWPLLGATVIAVTAFAPIGLSEDATGEYCGTLFTVLLI 489
            ++   + G TR +AAT     T +P+L  T++ +  F P+G +  + GEYC +LF V+L+
Sbjct: 418  MVSRLEAGDTRRRAATYAFKTTAFPMLTGTLVMIAGFIPVGFASSSAGEYCFSLFAVVLM 477

Query: 490  SLMLSWFTAISLTPFF-ADLFFRGQKAPASGEESDPYQGFIFVVYRRFLEFCMRRAWLTM 548
            +L+ SW  AI  +P   A L     K  A+G       G +   Y R L   +R    T+
Sbjct: 478  ALLSSWIVAILFSPLTGAWLLPEKLKHHAAG------PGRMARGYGRLLRTALRHRLATL 531

Query: 549  GVLVLGLAASLYGFTKVKQAFFPSSTTPMFMVDVWMPEGTDIRATDAILLELEKWLSAQE 608
            G+ +  L  S+YG T ++  FFPSS  P  +V + +       AT+     LE+ L+   
Sbjct: 532  GIALAVLGLSVYGTTFMQGEFFPSSDRPELLVSLTLLANASQSATEKQTERLERALAGNR 591

Query: 609  SVDSVTTTAGKGLQRFMLTYSPEKSYAAYGEITTRVTDYQQLAALMARFRAHLDARYPQI 668
            ++D  +T  G G  RF L            ++     D      L  +    L A++  +
Sbjct: 592  NIDHYSTYVGSGAIRFYLPMDVLLDNENTAQLVVVAKDLAARDRLREQLNTLLSAQFSDL 651

Query: 669  NYKLKQIELGPGGGAKIEARIVGSDPTVLRSIAAQVMDVMYADPGAYNIRHDWRERTKVL 728
              ++  +ELGP  G  I+ R+ G D   +R  A ++ + +   P    +     E  + L
Sbjct: 652  TSRVSPLELGPPVGWPIKYRVSGPDYLKVREYAGRLAEAIGRSPLTREVNQTAGEPERTL 711

Query: 729  EPQFNESQARRYGITKADVDEFLAMSFSGKTIGVYRDGTTLMPIVARLPEEERVDIRNIE 788
              Q N++ AR  G++   + + L   +SG T+   RD   L+ +V R  + ER+++  + 
Sbjct: 712  VLQVNQTAARAAGVSSQSLAQTLNTVWSGTTVTSIRDDDRLVDVVLRANDSERLNLATLS 771

Query: 789  GMKIWSPALSEYIPLQQVTLGYEMR--W--EDPLIVRKNRKRMLTVMADPDLLGEETAAT 844
             + +      E    Q+++LG      W  +DP++ R+ R   +TV    DL     A  
Sbjct: 772  SLTV------EGRDGQKISLGAVATPVWGVDDPVLWRRQRLPFITVQT--DLAPGMRAEG 823

Query: 845  LQQRLQPQIEAI--PLPPGYFLEWGGEYESSGDAKASLFKTMPLGYLFMFLITVFLFNSV 902
            +   L+P ++ +   LP GY +  GG    S    +S+F  +P+    M L+ +      
Sbjct: 824  VSDGLRPTVDKLRAGLPSGYSIVEGGVVAESEKGNSSVFDILPVTLGVMLLLLMLQLRRY 883

Query: 903  KESLIVWLTVPLAVIGVTTGLLALNTPFGFMALLGFLSLSGMLLKNGIVLLDQIEIEMHS 962
               L+     P  + G+   +L  +TP GF+ALLG ++L+GM+++N ++L+ +++  +  
Sbjct: 884  SRMLLALFMAPFGLPGIVMAMLPSDTPMGFVALLGAIALAGMIIRNAVILISEVDNNLAQ 943

Query: 963  GKDPYLAVVDASLSRVRPVCMAAVTTILGMIPLLPDIFFRPMAVTIMFGLGFATVLTLIV 1022
            G +   A++ A+  R RP+ + A   ILGMIP+   +F+ PMA  I+ GL  AT++TL V
Sbjct: 944  GMESDAAIIAAAEHRARPIFLTACAAILGMIPISHQVFWGPMAYAIIGGLIVATLVTLTV 1003

Query: 1023 VPVLYRL 1029
            +P  + +
Sbjct: 1004 LPASFSM 1010