Pairwise Alignments

Query, 1037 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1029 a.a., cation/multidrug efflux pump from Klebsiella michiganensis M5al

 Score =  537 bits (1384), Expect = e-156
 Identities = 310/1016 (30%), Positives = 544/1016 (53%), Gaps = 10/1016 (0%)

Query: 22   VAAYFINNRVISWMVSLIFLIGGTAAFFNLGRLEDPAFTIKDAMVVTSYPGATPQQVEEE 81
            ++A  +  R I+  + ++  + G  +FF LGR EDP FT+K   +++++PGAT Q+++++
Sbjct: 8    LSALAVRERSITLFLIILITVAGVLSFFELGRAEDPPFTVKQMTIISAWPGATAQEMQDQ 67

Query: 82   VTYPLEKAIQQLTYVDEVNSISSRGLSQITVTMKNNYGPDDLPQIWDELRRKVNDLKGAL 141
            V  PLEK +Q+L + D   + +  GL+   ++++++  P  + + + + R+K+ D    L
Sbjct: 68   VAEPLEKRMQELKWYDRSETYTRPGLAYTMLSLQDSTPPSQVQEEFYQARKKLGDEAKNL 127

Query: 142  PPGVNPPLVIDDFGDVYGILLAVTGEGYSYKELLDYVDYLRRELELIDGVSKVSVSGQQQ 201
            P GV  P+  D+F DV   L A+  +G   + L+   + LR+ L  + GV KV++ G+Q 
Sbjct: 128  PAGVIGPMFNDEFSDVTFALFALKAKGEPQRLLVRDAESLRQRLLHVPGVKKVNIIGEQA 187

Query: 202  EQVFIEISMKRISTLGISPQTVFNLLSTQNLVSDAGAIRIGSEYIRIHPTGEFDDVEKLG 261
            E++F+  S  R++TLG+SPQ +F+ L++QN+++ AG+I      + I   G FD +EK+ 
Sbjct: 188  ERIFVSFSHDRLATLGVSPQDIFSALNSQNVLTPAGSIDTKGPQVFIRLDGAFDKLEKIR 247

Query: 262  DLILSERGAQGLIYLRDVAEVKRGYVEVPSNVITFNGKLALNVGVSFAQGVNVVEVGQRF 321
            +  +  +G    + L DVA V+RGY +  +      G+ AL +G+    G N +++G+  
Sbjct: 248  ETPIVVQGR--TLQLSDVATVERGYEDPATFQNRNQGETALLLGIVMRDGWNGLDLGKAL 305

Query: 322  DRRLAELKYQQPIGIDIAEVYSQPKEVDKSVSGFVVSLGQAVAIVIIVLLFFMGLRSGLL 381
            D   A++    P+G+ + +V  Q   +  +V  F++    A+ +V++V    MG R G++
Sbjct: 306  DAETAKINAGMPLGMTLTKVTDQSVNISSAVDEFMIKFFVALLVVMVVCFVSMGWRVGVV 365

Query: 382  IGLILLLTVLGTFIFMQYFKIDLQRISLGALVIALGMLVDNAIVVVEGILIGTQKGRTRL 441
            +   + LT+   F+ M+    +  RI+LG+L++ALG+LVD+AI+ +E +++  ++G  R+
Sbjct: 366  VAAAVPLTLAIVFVVMEASGKNFDRITLGSLILALGLLVDDAIIAIEMMVVKMEEGYDRI 425

Query: 442  QAATDIVTQTKWPLLGATVIAVTAFAPIGLSEDATGEYCGTLFTVLLISLMLSWFTAISL 501
            +A+    + T  P+L  T++    F P G ++   GEY   +F ++ I+L+ SW  A+  
Sbjct: 426  KASAYAWSHTAAPMLAGTLVTAVGFMPNGFAQSTAGEYTSNMFWIVGIALIASWIVAVVF 485

Query: 502  TPFFADLFFRGQKAPASGEESDPYQGFIFVVYRRFLEFCMRRAWLTMGVLVLGLAASLYG 561
            TP+         K    G  +  Y    +  +RR L + + R W+  G ++     ++ G
Sbjct: 486  TPYLGVKMLPDIK-KVEGGHAAIYNTRHYNRFRRLLAWVIARKWIVAGTVIAVFTVAILG 544

Query: 562  FTKVKQAFFPSSTTPMFMVDVWMPEGTDIRATDAILLELEKWLSAQESVDSVTTTAGKGL 621
               VK+ FFP+S  P  +V+V MP GT I  T+A   ++E WL  Q+    VT+  G+G 
Sbjct: 545  MGLVKKQFFPTSDRPEVLVEVQMPYGTAIEQTNATAAKIEAWLRKQKEAKIVTSYIGQGA 604

Query: 622  QRFMLTYSPEKSYAAYGEITTRVTDYQQLAALMARFR-AHLDARYPQINYKLKQIELGPG 680
             RF L  +PE    ++ +I     + +   AL  R R A      P+   ++ Q+  GP 
Sbjct: 605  PRFFLAMAPELPDPSFAKIVVLTDNPEAREALKFRLREAVAGGLTPEARVRVTQLVFGPY 664

Query: 681  GGAKIEARIVGSDPTVLRSIAAQVMDVMYADPGAYNIRHDWRERTKVLEPQFNESQARRY 740
                +  R++G DPT LR IA +V  VM A P    +  DW  R   L    N+ + +  
Sbjct: 665  SPYPVAYRVMGPDPTTLREIADKVEKVMQASPMMRTVNTDWGPRVPALHFTLNQDRLQAV 724

Query: 741  GITKADVDEFLAMSFSGKTIGVYRDGTTLMPIVARLPEEERVDIRNIEGMKIWSPALSEY 800
            G+T     + L    SG  I   R+    + ++ R   + R+D   I G  +   A  + 
Sbjct: 725  GLTSNAAAQQLQFLLSGIPITSVREDIRSVQVMGRAAGDIRLDPAKIAGFTLVG-AAGQR 783

Query: 801  IPLQQVTLGYEMRWEDPLIVRKNRKRMLTVMAD--PDLLGEETAATLQQRLQPQIEAIPL 858
            IPL Q+    E++ E+P++ R++R   +TV  D   +L   + +  + + LQP I+   L
Sbjct: 784  IPLSQIG-EIEVQMEEPVMRRRDRIPTITVRGDIAENLQPPDVSTAITKALQPVIDT--L 840

Query: 859  PPGYFLEWGGEYESSGDAKASLFKTMPLGYLFMFLITVFLFNSVKESLIVWLTVPLAVIG 918
            P GY +E  G  E SG A  ++    P+      LI +    S+   ++V+LT PL +IG
Sbjct: 841  PDGYRIEQAGSIEESGKATKAMVPLFPIMIAMTLLIIILQVRSMAAMVMVFLTAPLGLIG 900

Query: 919  VTTGLLALNTPFGFMALLGFLSLSGMLLKNGIVLLDQIEIEMHSGKDPYLAVVDASLSRV 978
            V   LL  N PFG   L+G ++LSG+L++N ++L+ QI      G  P+ AVV+A++ R 
Sbjct: 901  VVPTLLLFNQPFGINTLVGLIALSGILMRNTLILIGQIHHNEQEGLAPFHAVVEATVQRA 960

Query: 979  RPVCMAAVTTILGMIPLLPDIFFRPMAVTIMFGLGFATVLTLIVVPVLYRLFHHVK 1034
            RPV + A+  IL  IPL   +F+  +A T++ G    T++TL+ +P +Y ++  ++
Sbjct: 961  RPVLLTAMAAILAFIPLTHSVFWGTLAYTLIGGTFGGTIITLVFLPAMYAIWFKIR 1016