Pairwise Alignments

Query, 1037 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1026 a.a., acriflavin resistance protein (RefSeq) from Shewanella sp. ANA-3

 Score =  354 bits (909), Expect = e-101
 Identities = 266/1022 (26%), Positives = 480/1022 (46%), Gaps = 30/1022 (2%)

Query: 22   VAAYFINNRVISWMVSLIFLIGGTAAFFNLGRLEDPAFTIKDAMVVTSYPGATPQQVEEE 81
            + A+  N R++S +++L+ L+ G  A  +L R EDP  T + A V+T YPGA+ ++VE  
Sbjct: 2    IKAFVENGRLVSLVIALL-LVAGFGAMSSLPRTEDPHITNRFASVITPYPGASAERVEAL 60

Query: 82   VTYPLEKAIQQLTYVDEVNSISSRGLSQITVTMKNNYGPDDLPQIWDELRRKVNDLKGAL 141
            VT  LE  +++L  +  + S S  G+S I + +K+     D   +W   R  + D +  L
Sbjct: 61   VTEVLENQLRRLEEIKLIQSTSRPGISVIQLELKDTV--TDTDPVWSRARDLLADARNTL 118

Query: 142  PPGVNPPLVIDDFGDVYGILLAVTGEGYSYKE---LLDYVDYLRRELELIDGVSKVSVSG 198
            P G+  P + D  G  Y  +L++     S      L  Y   L+  L L+ G   V + G
Sbjct: 119  PDGIQTPTLDDQVGYAYTAILSLVWNDSSQPRVDMLNRYAKELQSRLRLLSGTDFVKLYG 178

Query: 199  QQQEQVFIEISMKRISTLGISPQTVFNLLSTQNLVSDAGAIRIGSEYIRIHPTGEFDDVE 258
              +E++ +++   ++S L ++P T+  +LS+ +    AG I        +  +GE D   
Sbjct: 179  APEEEILVQLDGYKMSQLQLTPGTIAKILSSADSKIAAGEINNNHFRALVEVSGELDSQS 238

Query: 259  KLGDLILSERGAQGLIYLRDVAEVKRGYVEVPSNVITFNGKLALNVGVSFAQGVNVVEVG 318
            ++  + L       +I L D+A + R       ++   +G+  + V         V    
Sbjct: 239  RIRQVPLKVDAQGQIIRLGDIAHISRQPKTPADSIALVDGEQGVFVAARMLNNTRVDIWQ 298

Query: 319  QRFDRRLAELKYQQPIGIDIAEVYSQPKEVDKSVSGFVVSLGQAVAIVIIVLLFFMGLRS 378
             +  + + E   + P  I +  ++ Q     + + G +V+L Q   I++ VLL  +GLR+
Sbjct: 299  GQVKQLVDEFNQELPANIKVQWLFEQNSYTSERLGGLIVNLLQGFVIILAVLLLTLGLRN 358

Query: 379  GLLIGLILLLTVLGTFIFMQYFKIDLQRISLGALVIALGMLVDNAIVVVEGILIGTQKGR 438
             +++ L L LT L T   M+Y  + + ++S+  LV+ALG++VDNAIV+V+ I    Q+G 
Sbjct: 359  AIIVALSLPLTALFTLACMKYIGLPIHQMSVTGLVVALGIMVDNAIVIVDAIAQRRQQGM 418

Query: 439  TRLQAATDIVTQTKWPLLGATVIAVTAFAPIGLSEDATGEYCGTLFTVLLISLMLSWFTA 498
            +RL A ++ +     PL G+T+  + AFAPI L   A GE+ G +   ++ +L+ S+  +
Sbjct: 419  SRLSAVSETLHHLWLPLAGSTITTILAFAPIVLMPGAAGEFVGGIAMSVMFALLGSYVIS 478

Query: 499  ISLTPFFADLFFRGQKAPASGEESDPYQGFIFV-----VYRRFLEFCMRRAWLTMGVLVL 553
             +L    A  F    K P        YQ  I V      ++  L F + R  L+   + +
Sbjct: 479  HTLIAGLAGRFSLEGKHPVW------YQHGINVPLVSGYFQASLRFALNRPLLSATFIGI 532

Query: 554  GLAASLYGFTKVKQAFFPSSTTPMFMVDVWMPEGTDIRATDAILLELEKWLSAQESVDSV 613
                  Y   K+ + FFP S   MF +++++     +  T   +  ++K L   E +  V
Sbjct: 533  IPLLGFYASGKMTEQFFPPSDRDMFQIELYLAPHVSLENTLNQVQLMDKQLHQIEGIIQV 592

Query: 614  TTTAGKGLQRFMLTYSPEKSYAA-YGEITTRVTDYQQLAALMARFRAHLDARYPQINYKL 672
                G     F    +  +  A  Y +   + +D+++  AL+   +  LD  +P+    +
Sbjct: 593  DWVVGGNTPSFYYNLTQRQQGATNYAQAMVKASDFERANALIPELQQTLDKAFPEAQVLV 652

Query: 673  KQIELGPGGGAKIEARIVGSDPTVLRSIAAQVMDVMYADPGAYNIRHDWRERTKVLEPQF 732
            +++E GP   A +E  I G +   LRS+  +V +++ A P   + R         +  Q 
Sbjct: 653  RKLEQGPPFNAPVELMIFGPNLETLRSLGDEVRNILAATPDVLHTRATLSAGAPKVWLQV 712

Query: 733  NESQARRYGITKADVDEFLAMSFSGKTIGVYRDGTTLMPIVARLPEEERVDIRNIEGMKI 792
            NE  +   G+T  D+   + M+ +G   G   + T  +PI  RL +  R     +  +++
Sbjct: 713  NEDASLISGLTLTDIARQVQMATTGVIGGSVLEQTESLPIRVRLGDTSREQASRLSEIQL 772

Query: 793  WSPALSEYIPLQQVTLGYEMRWEDPLIVRKNRKRMLTVMADPDLLGEETAATLQQRLQPQ 852
             +P+    +PL  ++   E++     I R+N +R+ T+ A   ++     A +   ++ +
Sbjct: 773  VTPS-GTAVPLSALSHN-EVQVSRGAIPRRNGQRVNTIEA--YIVSGVLPAQVLNDVKAK 828

Query: 853  IEAIPLPPGYFLEWGGEYESSGDAKASLFKTMPLGYLFMFLITVFLFNSVKESLIVWLTV 912
            + AI LP GY +E GGE     +A  +L   + L    +    V  FNS + + I+ L+ 
Sbjct: 829  VAAISLPAGYRIEIGGESAKRNEAVGNLLSNLILVVTLLLATVVLSFNSFRLTAIILLS- 887

Query: 913  PLAVIGVTTGLLAL---NTPFGFMALLGFLSLSGMLLKNGIVLLDQIEIEMHSGKDPYLA 969
              A+     GLLA+     PFGF  ++  L L G+ +   IV+L ++E   ++       
Sbjct: 888  --ALQSAGLGLLAVYVFGYPFGFPVIIALLGLMGLAINAAIVILAELEDTDNARAGDKEV 945

Query: 970  VVDASLSRVRPVCMAAVTTILGMIPLL--PDIFFRPMAVTIMFGLGFATVLTLIVVPVLY 1027
            ++    S  R +    +TT+ G IPL+     F+ P A+ I  G    T+L+L+ VP +Y
Sbjct: 946  IITTVSSCGRHISSTTITTVGGFIPLIIAGGGFWPPFAIAIAGGTLLTTLLSLVWVPTMY 1005

Query: 1028 RL 1029
             L
Sbjct: 1006 LL 1007