Pairwise Alignments

Query, 396 a.a., cystathionine beta-lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 391 a.a., methionine gamma-lyase (RefSeq) from Shewanella loihica PV-4

 Score =  189 bits (480), Expect = 1e-52
 Identities = 123/387 (31%), Positives = 197/387 (50%), Gaps = 12/387 (3%)

Query: 7   TRLVTAGRNKKWTLGVVNPPVQRASTVVFDTVAQKNQAAINRANKTLFYGRRGTTTHFAF 66
           T+++ AG        +V+P VQ A T  F+TV Q          +   Y R G  T    
Sbjct: 9   TQVIHAGHEANQHGALVSPLVQSA-TFTFETVEQGGDCFAGE-QQGYIYTRLGNPTTAEL 66

Query: 67  QEAMVEIEGGAGCVLYPCGAAAITNAILSFVAQGDHILMVDTCYEPTRDFCEKVLKKLGV 126
           +  M  +EG         G AA++ A+L+ ++QGDH++     Y  T     +  K+ G+
Sbjct: 67  ERKMAVLEGSEAAAATASGMAAVSAALLTNLSQGDHLVASKAVYGCTFALMTEQFKRFGI 126

Query: 127 STTYYDPMLGEGIRELIQPNTKVLFTESPGSLTMEVQDIPTLSRIAHEHDIVVMLDNTWA 186
             T  D      I + I+PNTK LF E+P +  ++V D+  ++ +A  H +V ++DNT+ 
Sbjct: 127 EVTLVDFCEVANIAQAIRPNTKALFCETPVNPHLDVYDLAAIAALAKRHQLVSIVDNTFM 186

Query: 187 AGVLFSPFEHGVDISIQAATKYIVGHSDVMLGTAVANEKCWAQLR-EHSYLMGQYASPDD 245
             +L  P   G+D+ I +ATKY+ GH DV+ G     E+   +++ E    +G   SP D
Sbjct: 187 TPLLQRPLSMGIDMVIHSATKYLNGHGDVIAGIVCGTEEMITKVKLEVLKDIGGVISPHD 246

Query: 246 VYMAMRGLRTLDVRLRQHEQNSLQIAQWLQTRPEVDHVRHPALATCPGHEFFERDFTGGN 305
            ++ +RGL+TLDVRL +H  N+ ++A++LQ  P+V  V +P L    GH    +      
Sbjct: 247 AWLILRGLKTLDVRLARHCDNAERVAEYLQQHPQVARVYYPGLKGHSGHALLGKQMLRAG 306

Query: 306 GLFSFVLKTTHPEATTALLDGMQHFSMGFSWGGFESLI-----LAHEPKAFTSLRSVANP 360
           G+ +F LK +  +A  A  + ++ F +  S G  ESLI     + H P    S  +  + 
Sbjct: 307 GVVAFELKGSF-DAAKAFANRLKLFKIAVSLGDAESLIQHPASMTHSP---YSPEARMDA 362

Query: 361 HFCGTLLRVHIGLEDVEDLIADLEAGF 387
               +LLR+ +GLED +D+IADL   F
Sbjct: 363 GIGDSLLRISLGLEDSDDIIADLAQAF 389