Pairwise Alignments

Query, 448 a.a., sodium-dependent transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 430 a.a., Sodium-dependent transporter family protein from Pseudomonas fluorescens FW300-N2E2

 Score =  176 bits (447), Expect = 1e-48
 Identities = 139/446 (31%), Positives = 213/446 (47%), Gaps = 66/446 (14%)

Query: 44  GGAVFLLVYLCMVFLLAYPMLVAELTIGRYGQSNPIRAFRSVWPQG------KWGAILLG 97
           GG  F+L++L  + L+  P+++AE  IGR  + +P  A + +  +        WGA    
Sbjct: 6   GGGAFVLMFLACIALIGAPVMLAETLIGRRARQSPANALKVLAVEAGHSTKWSWGAFA-- 63

Query: 98  VIGMVVVSLILSFYAIVAGWLVGSLFGSGLTLIGADSASQWLTSFSTE-----RNLILMV 152
             GM+   LILSFY++V GW +  +   G       +  Q    F        R  +   
Sbjct: 64  --GMITALLILSFYSVVGGWSLDYIIDMGRGDFQGATPDQVGAYFGNVIADPWRLTLWHT 121

Query: 153 SFMVLTMFVVRNGVANGIEKWSTRLMPLLFVLFGLLTVYIFTQEGALDGLKMYLVPDLSH 212
            FMVL+  V+  GV  G+E+    +MPLLFV+  +L  Y  T    ++G+       +  
Sbjct: 122 IFMVLSAVVIARGVVAGLERSLRIMMPLLFVMILVLLGYSMTTGHFMEGVHF-----MFD 176

Query: 213 FTPDVVVS----AMGQAFFSLSLGVCVMTTYGSYLNKEANLPKTAAQVALIDTGVAFIAG 268
           F P+ V+     AMG AFFSLS+GV  +  YG+Y+ K A+L +T   VAL+DT V+ +AG
Sbjct: 177 FQPEKVLDGLLPAMGHAFFSLSVGVGSIMIYGAYMPKNASLTRTVFGVALLDTFVSLLAG 236

Query: 269 LMVLPAMFVAKHNGVEIFSSSGELLNSDTLVFTVLPAMFDTMGAVGAVIGIIFFLLMIIA 328
           + + P +F A  N  E             L+F  LP  F +M A G V+G++FFLL+ IA
Sbjct: 237 VALFPIVFAAGLNPSE----------GPGLMFVSLPFAFGSM-AFGQVMGVVFFLLVAIA 285

Query: 329 ALTSSISMLEVPVACAVEELQQKRSSAVLWIG------GLVTIIS------GVIVLNFSS 376
           A +S+IS+LE  VA  VE     R+    W+       GL T+ S          +N   
Sbjct: 286 AWSSAISLLEPMVAYLVERTLLSRAWVTFWLAFTCWFVGLGTVFSFNIWKQAKFFVNEDG 345

Query: 377 L--------------FGLVINFTTVYSQPIIALLITLIAGWIWNRNQILSELKQGCPDIE 422
           L              FG++  FT+    P+  L   + AGWI  R  +  EL      + 
Sbjct: 346 LFHLYQWGATGGLDFFGVIDFFTSRIMLPLGGLCFVVFAGWIMGREAVRDEL-----SLR 400

Query: 423 NSLFWKIWPWYVRLVCPVLMLMVFFA 448
           + + + +  + +R V P+ +L+VF A
Sbjct: 401 SPVLFGLSLFLMRYVAPIGILVVFAA 426