Pairwise Alignments

Query, 448 a.a., sodium-dependent transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 467 a.a., symporter from Pseudomonas fluorescens FW300-N2C3

 Score =  210 bits (535), Expect = 7e-59
 Identities = 154/479 (32%), Positives = 237/479 (49%), Gaps = 66/479 (13%)

Query: 11  GQFTSRFGFIMAAAGSAVGLGNVWGFPTQAASNGGAVFLLVYLCMVFLLAYPMLVAELTI 70
           G + SR+ FI+AA GSAVGLG++W FP      GG  F+L++L  + L+  P+++AE  I
Sbjct: 10  GSWASRWVFILAATGSAVGLGSIWKFPYMVGVYGGGAFVLMFLACIALIGAPVMLAETLI 69

Query: 71  GRYGQSNPIRAFRSVWPQG------KWGAILLGVIGMVVVSLILSFYAIVAGWLVGSLFG 124
           GR  + +P  A + +  +        WGA      GM+   LILSFY++V GW +  +  
Sbjct: 70  GRRARQSPANALKVLAVEAGHSTKWSWGAF----AGMITALLILSFYSVVGGWSLDYIID 125

Query: 125 SGLTLIGADSASQWLTSFSTE-----RNLILMVSFMVLTMFVVRNGVANGIEKWSTRLMP 179
            G       +  Q    F        R  +    FMVL+  V+  GV  G+E+    +MP
Sbjct: 126 MGRGDFQGATPDQVGAYFGNVIADPWRLTLWHTIFMVLSAVVIARGVVAGLERSLRIMMP 185

Query: 180 LLFVLFGLLTVYIFTQEGALDGLKMYLVPDLSHFTPDVVVS----AMGQAFFSLSLGVCV 235
           LLFV+  +L  Y  T    ++G+       +  F P+ V+     AMG AFFSLS+GV  
Sbjct: 186 LLFVMILVLLGYSMTTGHFMEGVHF-----MFDFQPEKVLDGLLPAMGHAFFSLSVGVGS 240

Query: 236 MTTYGSYLNKEANLPKTAAQVALIDTGVAFIAGLMVLPAMFVAKHNGVEIFSSSGELLNS 295
           +  YG+Y+ K A+L +T   VAL+DT V+ +AG+ + P +F A  N  E           
Sbjct: 241 IMIYGAYMPKNASLTRTVFGVALLDTFVSLLAGVALFPIVFAAGLNPSE----------G 290

Query: 296 DTLVFTVLPAMFDTMGAVGAVIGIIFFLLMIIAALTSSISMLEVPVACAVEELQQKRSSA 355
             L+F  LP  F +M A G V+G++FF+L+ IAA +S+IS+LE  VA  VE  +  R+  
Sbjct: 291 PGLMFVSLPFAFGSM-AFGQVMGVVFFVLVAIAAWSSAISLLEPMVAYLVERTRISRAWV 349

Query: 356 VLWIG------GLVTIIS------GVIVLNFSSL--------------FGLVINFTTVYS 389
             W+       GL T+ S          +N   L              FG++  FT+   
Sbjct: 350 TFWLAFTCWFVGLGTVFSFNIWKQAKFFVNEGGLFHLYQWGATGGLDFFGVIDFFTSRIM 409

Query: 390 QPIIALLITLIAGWIWNRNQILSELKQGCPDIENSLFWKIWPWYVRLVCPVLMLMVFFA 448
            P+  L   + AGW+  R+ +  EL      + + + + +  + +R V P+ +L+VF A
Sbjct: 410 LPLGGLCFVVFAGWVMGRDAVRDEL-----SLRSPVLFALSLFLMRYVAPIGILVVFAA 463