Pairwise Alignments

Query, 448 a.a., sodium-dependent transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 430 a.a., Sodium-dependent transporter family protein from Pseudomonas fluorescens FW300-N1B4

 Score =  170 bits (431), Expect = 7e-47
 Identities = 130/446 (29%), Positives = 209/446 (46%), Gaps = 66/446 (14%)

Query: 44  GGAVFLLVYLCMVFLLAYPMLVAELTIGRYGQSNPIRAFRSVWPQG------KWGAILLG 97
           GG  F+L++L  + L+  P+++AE  IGR  + +P  A + +  +        WGA    
Sbjct: 6   GGGAFVLMFLACIALIGVPVMLAETLIGRRARQSPANALKVLALEAGHSAKWSWGAFA-- 63

Query: 98  VIGMVVVSLILSFYAIVAGWLVGSLFGSGLTLIGADSASQWLTSFSTE-----RNLILMV 152
             GM+   LILSFY++V GW +  +   G       +  Q    F        R  +   
Sbjct: 64  --GMITALLILSFYSVVGGWSLDYIIDMGRGDFQGATPDQVGAYFGNVIADPWRLTLWHT 121

Query: 153 SFMVLTMFVVRNGVANGIEKWSTRLMPLLFVLFGLLTVYIFTQEGALDGLKMYLVPDLSH 212
            FM+L+  V+  GV  G+E+    +MPLLFV+  +L  Y  T    ++G+       +  
Sbjct: 122 IFMLLSAVVIAKGVVAGLERSLRIMMPLLFVMVIVLLGYSMTTGHFMEGVHF-----MFD 176

Query: 213 FTPDVVVS----AMGQAFFSLSLGVCVMTTYGSYLNKEANLPKTAAQVALIDTGVAFIAG 268
           F P+ V+     AMG AFFSLS+GV  +  YG+Y+ K +++  T   VAL+DT V+ +AG
Sbjct: 177 FHPEKVLDGLLPAMGHAFFSLSVGVGSIMIYGAYMPKSSSISGTIVGVALLDTFVSLVAG 236

Query: 269 LMVLPAMFVAKHNGVEIFSSSGELLNSDTLVFTVLPAMFDTMGAVGAVIGIIFFLLMIIA 328
           L + P +F A  N  E             L+F  LP  F  + A G ++G++FF+L+ IA
Sbjct: 237 LALFPIVFAAGLNPSE----------GPGLMFVSLPFAFGNV-AFGQLMGVVFFVLVAIA 285

Query: 329 ALTSSISMLEVPVACAVEELQQKRSSAVLWIGGLVTIISGVIVLNFS------------- 375
           A +S+IS+LE  VA  VE  +  R+    W+  +   +    V +F+             
Sbjct: 286 AWSSAISLLEPMVAYLVERTKISRAWVTFWLAFICWFVGLGTVFSFNIWKQAKFFVNEGG 345

Query: 376 -------------SLFGLVINFTTVYSQPIIALLITLIAGWIWNRNQILSELKQGCPDIE 422
                          FG++  FT+    P+  L   + AGW+  R  +  EL      I 
Sbjct: 346 MFHLYQWGAAGGLDFFGVIDFFTSRIMLPLGGLCFVVFAGWVMGREAVRDEL-----SIR 400

Query: 423 NSLFWKIWPWYVRLVCPVLMLMVFFA 448
             + + +  + +R V P+ +L+VF A
Sbjct: 401 RPVLFALSLFLMRYVAPIGILVVFAA 426