Pairwise Alignments

Query, 448 a.a., sodium-dependent transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 469 a.a., Na+-dependent transporters of the SNF family from Pseudomonas stutzeri RCH2

 Score =  246 bits (627), Expect = 1e-69
 Identities = 164/459 (35%), Positives = 247/459 (53%), Gaps = 37/459 (8%)

Query: 7   SGSRGQFTSRFGFIMAAAGSAVGLGNVWGFPTQAASNGGAVFLLVYLCMVFLLAYPMLVA 66
           + SRG ++SR+ F +AA GSAVGLGN+W FP     NGG  F+LVYL  + L+  P+L+ 
Sbjct: 22  NASRGLWSSRWVFFLAATGSAVGLGNIWKFPYVTGQNGGGAFVLVYLACILLIGIPLLMT 81

Query: 67  ELTIGRYGQSNP----IRAFRSVWPQGKWGAILLGVIGMVVVSLILSFYAIVAGWL---V 119
           E+ IGR G++NP     R  R      +W  +  G +G +   LILSFY +VAGW    V
Sbjct: 82  EVMIGRRGRANPDGAVARLAREAGASSRWRVV--GWLGGLTGFLILSFYLVVAGWALAYV 139

Query: 120 GSLFGSGLTLIGADSASQWLTSFSTERNLILMVSFMVL--TMFVVRNGVANGIEKWSTRL 177
            + F  G   +  +++ +   +   +   +++ + +VL  TM +V  GV  G+E+    L
Sbjct: 140 PATFSGGFAGVSGEASGELFGALLADPLRLVVCATLVLAATMLIVGFGVRGGLERSLRFL 199

Query: 178 MPLLFVLFGLLTVYIFTQEGALDGLKMYLVPDLSHFTPDVVVSAMGQAFFSLSLGVCVMT 237
           MP LFVL  +L VY   +      L+   VPD S  T   V+ A+G AFF+LSLG   M 
Sbjct: 200 MPGLFVLMLVLVVYAAIEGEFAQALQFLFVPDFSALTAQSVLIALGHAFFTLSLGCGAMM 259

Query: 238 TYGSYLNKEANLPKTAAQVALIDTGVAFIAGLMVLPAMFVAKHNGVEIFSSSGELLNSDT 297
            YGSYL +  ++ KT+  VAL DT VA +AGL + P +F    NG+E  +  G       
Sbjct: 260 VYGSYLPEGTSIAKTSILVALADTAVALLAGLAIFPLVF---GNGLEPGAGPG------- 309

Query: 298 LVFTVLPAMFDTMGAVGAVIGIIFFLLMIIAALTSSISMLEVPVACAVEELQQKRSSAVL 357
           L+F  LP  F  M  +G V+G +FF++++IAALTS+IS+ E  +A   E  +  R+ AVL
Sbjct: 310 LIFVTLPIAFGQM-PLGQVVGGLFFIMLVIAALTSAISLSEPSIAWLTERFRISRTKAVL 368

Query: 358 WIGGLVTIISGVIVLNFS----------SLFGLVINFTTVYSQPIIALLITLIAGWIWNR 407
             G ++ ++S   V +F+          + F  +   TT +  P+  L   L  GW+  R
Sbjct: 369 GSGLVLWLLSLGSVFSFNHWADYQLFGKTFFDTLDYLTTNWLMPLGGLGTVLFTGWVLQR 428

Query: 408 NQILSELKQGCPDIENSLFWKIWPWYVRLVCPVLMLMVF 446
            Q++SE       I N+  ++ W   +R   PV +++VF
Sbjct: 429 -QVVSE----AIGIRNAGLFQAWWNLLRYGTPVAIVLVF 462