Pairwise Alignments

Query, 448 a.a., sodium-dependent transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 486 a.a., Na+-dependent transporters of the SNF family from Pseudomonas stutzeri RCH2

 Score =  223 bits (569), Expect = 8e-63
 Identities = 159/457 (34%), Positives = 240/457 (52%), Gaps = 50/457 (10%)

Query: 15  SRFGFIMAAAGSAVGLGNVWGFPTQAASNGGAVFLLVYLCMVFLLAYPMLVAELTIGRYG 74
           SR+GFI+AA GSAVGLGN+W FP      GG  F+L+YL  +  +  P+++ E+ IGR G
Sbjct: 12  SRWGFILAATGSAVGLGNIWKFPYITGEFGGGAFVLMYLLCILAIGVPVMMCEIAIGRRG 71

Query: 75  QSNPIRAFRSVWPQGKWGAILLGVIGMVVVS--LILSFYAIVAGW--------LVGSLFG 124
           + +PI A   V  +     +   V GM + +  LIL FY +VAGW        L GSL  
Sbjct: 72  RGSPIDAIGRVVRENNGNPLWKAVGGMAMTAGFLILCFYVVVAGWAFAYTVKMLDGSLAA 131

Query: 125 SGLTLIG----ADSASQW-LTSFSTERNLILMVSFMVLTMFVVRNGVANGIEKWSTRLMP 179
           + +  +G    A +++ W L  +S      L+V+  +LT+++V  GV  GIE     +MP
Sbjct: 132 TSVEALGGVFEAHNSNPWQLGGWS------LLVA--LLTLWIVAKGVQKGIENAVRWMMP 183

Query: 180 LLFVLFGLLTVYIFTQEGALDGLKMYLVPDLSHFTPDVVVSAMGQAFFSLSLGVCVMTTY 239
            L VL  +L  Y  T  G   G       D S  T + +++A+G AFF+LSL    + TY
Sbjct: 184 GLAVLLLILVGYAVTSGGFDQGFAFLFSFDTSKITGEALLAALGHAFFTLSLASGAILTY 243

Query: 240 GSYLNKEANLPKTAAQVALIDTGVAFIAGLMVLPAMFVAKHNGVEIFSSSGELLNSDTLV 299
           GSY+  + ++ +T   VA+ DT VA +AGL + P +F    NG++  +  G       L+
Sbjct: 244 GSYIPDDQSIARTTFMVAIADTCVALLAGLAIFPIIFA---NGMDPTAGPG-------LI 293

Query: 300 FTVLPAMFDTMGAVGAVIGIIFFLLMIIAALTSSISMLEVPVACAVEELQQKRSSAVLWI 359
           F  LP  F  M   G   G++FF ++ IAALTS+ISM+E  VA   E+    R  A +  
Sbjct: 294 FMSLPLAFQQM-PFGTAFGVLFFAMVSIAALTSAISMIEATVAYLNEKHGISRLKAAMGS 352

Query: 360 GGLVTIISGVIVLNFSSLFG---LVINF-------TTVYSQPIIALLITLIAGWIWNRNQ 409
           G ++ +IS + +L+F+ + G   +  NF       T+ +  P+  +   L+AG+      
Sbjct: 353 GAVLLVISMLAMLSFNLMSGWTPMGKNFFDWLDYLTSRWMMPLGGIFTVLLAGYALRSEI 412

Query: 410 ILSELKQGCPDIENSLFWKIWPWYVRLVCPVLMLMVF 446
           +  EL          L + +W + VR VCPVL+LMVF
Sbjct: 413 MRDELNL------PPLGYALWLFMVRYVCPVLILMVF 443