Pairwise Alignments

Query, 448 a.a., sodium-dependent transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 478 a.a., Sodium:neurotransmitter symporter from Pseudomonas syringae pv. syringae B728a

 Score =  216 bits (549), Expect = 2e-60
 Identities = 151/486 (31%), Positives = 237/486 (48%), Gaps = 80/486 (16%)

Query: 11  GQFTSRFGFIMAAAGSAVGLGNVWGFPTQAASNGGAVFLLVYLCMVFLLAYPMLVAELTI 70
           G + SR+ FI+AA GSAVGLG++W FP    + GG  F+LV+L  + L+  P+++AE  I
Sbjct: 21  GSWASRWVFILAATGSAVGLGSIWKFPYMVGAYGGGAFVLVFLACIALIGIPVMIAETLI 80

Query: 71  GRYGQSNPIRAFRSV------WPQGKWGAILLGVIGMVVVSLILSFYAIVAGWLVGSLFG 124
           GR  + +P  A +++       P+  WGA      GM+   LILSFY++V GW +  +  
Sbjct: 81  GRRSRLSPANALKTLAQEAGHSPRWSWGAF----AGMITALLILSFYSVVGGWSLDYIID 136

Query: 125 SGL------------TLIGADSASQWLTSFSTERNLILMVSFMVLTMFVVRNGVANGIEK 172
            G                GA  A  W       R ++    FM+L+  V+  GV  G+EK
Sbjct: 137 MGRGDFQGVSPDQVGAYFGAVIADPW-------RLILWHTIFMLLSAVVIGKGVEAGLEK 189

Query: 173 WSTRLMPLLFVLFGLLTVYIFTQEGALDGLKMYLVPDLSHFTPDVVVS----AMGQAFFS 228
               +MP+LF+L   L  Y  T    ++G+       +  F P+ V+     AMG AFFS
Sbjct: 190 SLRIMMPMLFLLMLALLGYSLTTGHFMEGVHF-----MFDFNPEKVLDGLLPAMGHAFFS 244

Query: 229 LSLGVCVMTTYGSYLNKEANLPKTAAQVALIDTGVAFIAGLMVLPAMFVAKHNGVEIFSS 288
           LS+GV  +  YG+Y+ K A++  T   +A++DT V+ +AGL + P +F A  N  E    
Sbjct: 245 LSVGVGSIMVYGAYMTKGASISSTVVGIAMLDTFVSLLAGLALFPIVFAAGLNPSE---- 300

Query: 289 SGELLNSDTLVFTVLPAMFDTMGAVGAVIGIIFFLLMIIAALTSSISMLEVPVACAVEEL 348
                    L+F  LP  F  + A G ++GI+FF+L+ +AA +S+IS+LE  VA  VE  
Sbjct: 301 ------GPGLMFVTLPYAFGNV-AFGQLMGIVFFVLVAVAAWSSAISLLEPMVAYLVERT 353

Query: 349 QQKRSSAVLWIGGLVTIISGVIVLNFS--------------------------SLFGLVI 382
           + +R+    W+      +    V +F+                            FG++ 
Sbjct: 354 RIRRAWVTFWLAFTCWFVGLGTVFSFNIWQKAKFFVNDGGAFHLYHWGASTGLDFFGVID 413

Query: 383 NFTTVYSQPIIALLITLIAGWIWNRNQILSELKQGCPDIENSLFWKIWPWYVRLVCPVLM 442
            FT+    P+  L   + AGW+ +R  +  EL      I + L + +  + +R V P+ +
Sbjct: 414 FFTSRIMLPLGGLCFVVFAGWVMSRETVRDEL-----SIRSPLLFNLTYFLMRYVAPLGI 468

Query: 443 LMVFFA 448
           L+VF A
Sbjct: 469 LVVFAA 474