Pairwise Alignments

Query, 235 a.a., TIGR01621 family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 317 a.a., pseudouridine synthase, RluA family from Pseudomonas stutzeri RCH2

 Score = 71.6 bits (174), Expect = 2e-17
 Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 16/194 (8%)

Query: 4   ILFTHPDFLLINKHPNVSVHKDDGDTMLLQEVATQTGDG--QLYLVHRLDKMTSGILLLA 61
           I++     +++NK   ++VH   G +  + E   Q      +L LVHRLD+ TSG+L++A
Sbjct: 97  IVYEDKALIVLNKPAGIAVHGGSGLSYGVIEALRQLRPDAKELELVHRLDRDTSGLLMVA 156

Query: 62  RNATAASELSQGFAKRKVEKFYLAI--GSKKPKKKQGLICGDMERSRRSSWKLVN-SQEN 118
           +  +    L Q      V+K Y+A+  G  +  KKQ +    ++ + RS  ++V  +++ 
Sbjct: 157 KKRSMLRHLHQALRGDGVDKRYMALVRGRWETSKKQ-VNAPLLKNTLRSGERMVEVTEDG 215

Query: 119 PAITQFFSAAAATGE--RLFLCKPHTGKTHQIRVALKSIGSAIVGDPIYNTAD------- 169
                 F      GE   L   KP TG+THQIRV  +  G +I GD  Y   +       
Sbjct: 216 KEALTLFHVLRRFGEFATLVEAKPVTGRTHQIRVHARHAGHSIAGDSKYGDEEFTREIRE 275

Query: 170 -ESDRGYLHAFALR 182
               R +LHA+ALR
Sbjct: 276 LGGKRLFLHAYALR 289