Pairwise Alignments

Query, 235 a.a., TIGR01621 family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., ribosomal large subunit pseudouridine synthase D from Synechococcus elongatus PCC 7942

 Score = 80.1 bits (196), Expect = 8e-20
 Identities = 53/153 (34%), Positives = 83/153 (54%), Gaps = 8/153 (5%)

Query: 46  LVHRLDKMTSGILLLARNATAASELSQGFAKRKVEKFYLAIGSKKPKKKQGLICGDMERS 105
           +VHRLD+ TSGILL+ARN      L + F +R+V K Y A+   +P    G I   +   
Sbjct: 386 VVHRLDQATSGILLVARNRPTQVALFEQFRRRQVHKVYEALLEGQPDCTAGTIDLPLRPD 445

Query: 106 -RRSSWKLVNSQENPAITQFFSAAAATGERLFL-CKPHTGKTHQIRVAL---KSIGSAIV 160
             R  ++LV+         ++     TG+R  +  +P TG+THQ+RV +   + +G  I+
Sbjct: 446 WTRRPYQLVDRDRGRPALTYYRCIDQTGDRCRMELEPITGRTHQLRVHMAHPEGLGQPIL 505

Query: 161 GDPIYNTADESDRGYLHAFALRFTYQGEVYQWL 193
           GD +Y     SDR YLHA ++RF +  ++  W+
Sbjct: 506 GDDLY--GQSSDRLYLHARSIRFRHPSQL-DWI 535