Pairwise Alignments

Query, 235 a.a., TIGR01621 family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 330 a.a., ribosomal large subunit pseudouridine synthase C protein from Sinorhizobium meliloti 1021

 Score = 70.9 bits (172), Expect = 3e-17
 Identities = 53/173 (30%), Positives = 86/173 (49%), Gaps = 12/173 (6%)

Query: 4   ILFTHPDFLLINKHPNVSVHKDDGDTMLLQEVATQTGDGQLYLVHRLDKMTSGILLLARN 63
           I+   P  L +     V+ H D     +L+   +Q G+ +  LVHRLD+ TSG+L++AR 
Sbjct: 105 IVLNKPAGLAVQGGSGVNRHIDK----MLEAWTSQKGE-KPRLVHRLDRDTSGVLVVART 159

Query: 64  ATAASELSQGFAKRKVEKFYLAIGSKKPKKKQGLICGDMERSRRSSW---KLVNSQENPA 120
             AA +L+  F +R  +K Y A+    P+K++  I   + +         ++    E+ A
Sbjct: 160 RGAAQQLTAAFRERDTKKTYWALVRGVPRKREDKISTWLVKEPTPDGDRVRIAKHGEDGA 219

Query: 121 --ITQFFSAAAATGERL--FLCKPHTGKTHQIRVALKSIGSAIVGDPIYNTAD 169
                ++      G+ L     +P+TG+THQ+RV    IG  I+GDP Y  AD
Sbjct: 220 DHAISYYRIVEQAGQNLAWLEMEPYTGRTHQLRVHAAHIGHPIIGDPKYFEAD 272