Pairwise Alignments

Query, 235 a.a., TIGR01621 family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 343 a.a., ribosomal large subunit pseudouridine synthase from Sinorhizobium meliloti 1021

 Score = 70.9 bits (172), Expect = 3e-17
 Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 49/228 (21%)

Query: 3   DILFTHPDFLLINKHPNVSVHKDDGDTM--LLQEVATQTGDG--------QLYLVHRLDK 52
           D+L+   D +++ K   + VH   G+    L+  +    GD         +  +VHRLDK
Sbjct: 91  DVLYEDADLIVLVKPAGLVVHPGAGNWTGTLVNALIHHCGDSLSGIGGVKRPGIVHRLDK 150

Query: 53  MTSGILLLARNATAASELSQGFAKR----KVEKFYLAIGSKKPKKKQGLICGDM----ER 104
            TSG++++A+N  A   LS  FA       +E+ Y A+   +P++ +G I   +    +R
Sbjct: 151 DTSGVMVVAKNDAAHRHLSDQFADHGRNGPLERAYRAVVWGRPRQLKGKIDAPLGRAGDR 210

Query: 105 SRRSSWKLVNSQENPAITQFF-----------SAAAATGERLFLCKPHTGKTHQIRVALK 153
           ++R+  +  +     AIT +            ++ A+T E    C   TG+THQIRV + 
Sbjct: 211 TKRAVKREDSDDAREAITHYEVVERYHEKPDGTSLASTVE----CHLETGRTHQIRVHMA 266

Query: 154 SIGSAIVGDPIYNTA----------------DESDRGYLHAFALRFTY 185
            IG  ++GDP Y  A                +   R  LHAF L+F +
Sbjct: 267 HIGHPLIGDPDYGAAFRTKANLLPEPARAAVNRFPRQALHAFMLQFEH 314