Pairwise Alignments

Query, 235 a.a., TIGR01621 family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., pseudouridylate synthase (RefSeq) from Shewanella amazonensis SB2B

 Score = 62.8 bits (151), Expect = 8e-15
 Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 6/169 (3%)

Query: 3   DILFTHPDFLLINKHPNVSVHKDDGDT------MLLQEVATQTGDGQLYLVHRLDKMTSG 56
           DI++     L+INK   + VH   G+        LL          +  ++HRLDK T+G
Sbjct: 85  DIVYEDDHILVINKQAGLVVHPGAGNADGTLMNALLHHCPEIEHVPRAGIIHRLDKDTTG 144

Query: 57  ILLLARNATAASELSQGFAKRKVEKFYLAIGSKKPKKKQGLICGDMERSRRSSWKLVNSQ 116
           ++++A+   A + L      R + + Y AI          +         + +   V+  
Sbjct: 145 LMVVAKTVEAQTHLVAALQARDITREYEAIVLGTMTAGGTVDAPIGRHPTKRTHMAVHHS 204

Query: 117 ENPAITQFFSAAAATGERLFLCKPHTGKTHQIRVALKSIGSAIVGDPIY 165
             P++T +  A           +  TG+THQIRV +  IG  +VGDP+Y
Sbjct: 205 GRPSVTHYRVAEKFRAHTRLRLRLETGRTHQIRVHMAHIGHVLVGDPVY 253