Pairwise Alignments

Query, 235 a.a., TIGR01621 family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 224 a.a., pseudouridylate synthase (RefSeq) from Shewanella amazonensis SB2B

 Score = 85.5 bits (210), Expect = 8e-22
 Identities = 61/194 (31%), Positives = 92/194 (47%), Gaps = 13/194 (6%)

Query: 3   DILFTHPDFLLINK------HPNVSVHKDDGDTMLLQEVATQTGDGQLYLVHRLDKMTSG 56
           DI +   D ++INK      +P ++ H  D     L  +  +       LVHRLD  TSG
Sbjct: 15  DIRYIDRDLIIINKPSGLLSNPGMAAHTHDSAITRLCRLYPEA-----ILVHRLDCATSG 69

Query: 57  ILLLARNATAASELSQGFAKRKVEKFYLAIGSKKPKKKQGLICGDMERSRRSS-WKLVNS 115
           I++ AR+  A S L   F  R  EK YLA  +   ++ +G I   + + R +  W+ V+ 
Sbjct: 70  IMVFARSKKAESNLKTQFQNRDTEKRYLAQVAGIIEQDEGTIDLPLGKDRSNPPWQKVDM 129

Query: 116 QEN-PAITQFFSAAAATGERLFLCKPHTGKTHQIRVALKSIGSAIVGDPIYNTADESDRG 174
            E  PA+T +   A      L   +P TG+THQ+RV + S+G  I+GD  Y    E  +G
Sbjct: 130 AEGRPAVTHYRVLARRENSTLVALEPETGRTHQLRVHMLSLGHPILGDDFYGRTQEFGQG 189

Query: 175 YLHAFALRFTYQGE 188
            +   + R     E
Sbjct: 190 TVEEASPRLCLHAE 203