Pairwise Alignments

Query, 235 a.a., TIGR01621 family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 225 a.a., pseudouridylate synthase (RefSeq) from Shewanella amazonensis SB2B

 Score = 67.0 bits (162), Expect = 3e-16
 Identities = 60/202 (29%), Positives = 89/202 (44%), Gaps = 25/202 (12%)

Query: 3   DILFTHPDFLLINKHPNV-------SVHKDDGDTMLLQEVATQTGDGQLYLVHRLDKMTS 55
           DIL    D ++INK   +        +H D   + +  E           +VHRLD  TS
Sbjct: 16  DILHQDKDIIVINKPSGLLSVPGRDPIHHDSAWSRIKAEHPNSQ------VVHRLDMATS 69

Query: 56  GILLLARNATAASELSQGFAKRKVEKFYLAIGSKKPKKKQG----LICGDMERSRRSSWK 111
           G+++ A   +A  EL + F  R+  K Y A  +   K        LIC    R R+   K
Sbjct: 70  GVMVYALRKSAEVELKRQFRDRETHKTYFARVAGHVKANCSVDLPLICDWPNRPRQ---K 126

Query: 112 LVNSQENPAITQFFSAAAATGERLFLCKPHTGKTHQIRVALKSIGSAIVGDPIYN---TA 168
           + +    P++T     +      L    P TG++HQ+RV + ++G  I+GD  Y      
Sbjct: 127 VDHEIGKPSLTHVDVISYGKRSTLVKLTPITGRSHQLRVHMMALGHPILGDGFYADPLAK 186

Query: 169 DESDRGYLHAFALRFT--YQGE 188
             +DR  LHA +L FT  Y GE
Sbjct: 187 SLADRLLLHAASLSFTHPYSGE 208