Pairwise Alignments

Query, 235 a.a., TIGR01621 family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 330 a.a., Pseudouridine synthase, RluD (NCBI) from Rhodospirillum rubrum S1H

 Score = 77.0 bits (188), Expect = 4e-19
 Identities = 67/207 (32%), Positives = 94/207 (45%), Gaps = 14/207 (6%)

Query: 4   ILFTHPDFLLINKHPNVSVHKDDGDTMLLQEVATQTGDG--QLYLVHRLDKMTSGILLLA 61
           IL      ++INK   ++V    G    L  +     DG     LVHRLDK TSG+L+LA
Sbjct: 96  ILHEDAHLIVINKEAGLAVQGGTGTPHHLDGMLESLADGGETPRLVHRLDKDTSGVLVLA 155

Query: 62  RNATAASELSQGFAKRKVEKFYLAIGSKKPKKKQGLICGDMER--SRRSSWKLVNSQENP 119
           R   AA  L+  F  R+  K Y AI   +P   QG I G + +    R     +N +E  
Sbjct: 156 RTQAAARALTSAFRSREALKVYWAIVVGRPPMLQGTIKGALAKVAGGRGERMEINEEEGK 215

Query: 120 -AITQFFSAAAATGERLFL-CKPHTGKTHQIRVALKSIGSAIVGDPIY-------NTADE 170
            A+T F     A     ++   P TG+THQ+RV    +G+ I+GD  Y          + 
Sbjct: 216 RAVTDFRVVDQAAKACAWVELHPRTGRTHQLRVHCLEMGTPILGDGKYGGPGAFLEGTEL 275

Query: 171 SDRGYLHAFALRFTY-QGEVYQWLCDP 196
             R +LHA AL   +  G V + +  P
Sbjct: 276 PKRMHLHARALALPHPAGGVLEIIAPP 302